RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 PITHD1Q9GZP4 211 aaPredicted RBP15.34■□□□□ 0.05
ABCA1-203ENST00000423487 TNFRSF12AQ9NP84 129 aa15.34■□□□□ 0.05
ABCA1-203ENST00000423487 SLC6A20Q9NP91 592 aa15.34■□□□□ 0.05
ABCA1-203ENST00000423487 C1GALT1Q9NS00 363 aa15.34■□□□□ 0.05
ABCA1-203ENST00000423487 GEMIN8Q9NWZ8 242 aaKnown RBP15.34■□□□□ 0.05
ABCA1-203ENST00000423487 VTI1BQ9UEU0 232 aa15.34■□□□□ 0.05
ABCA1-203ENST00000423487 MARCOQ9UEW3 520 aaPredicted RBP15.34■□□□□ 0.05
ABCA1-203ENST00000423487 SNX6Q9UNH7 406 aa15.34■□□□□ 0.05
ABCA1-203ENST00000423487 FIS1Q9Y3D6 152 aa15.34■□□□□ 0.05
ABCA1-203ENST00000423487 PCDHGA11Q9Y5H2 935 aa15.34■□□□□ 0.05
ABCA1-203ENST00000423487 VPS13AQ96RL7 3174 aa15.34■□□□□ 0.05
ABCA1-203ENST00000423487 KCNE1BA0A087WTH5 132 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 IGKV1-8A0A0C4DH67 115 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 TNFSF14O43557 240 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 GDF9O60383 454 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 KRT6AP02538 564 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 KRT6BP04259 564 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 RPLP0P05388 317 aaKnown RBP15.33■□□□□ 0.05
ABCA1-203ENST00000423487 TROVE2P10155 538 aaKnown RBP eCLIP15.33■□□□□ 0.05
ABCA1-203ENST00000423487 CD22P20273 847 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 KRT6CP48668 564 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 FOXA1P55317 472 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 PPP1CAP62136 330 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 CSNK1G2P78368 415 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 ZRSR2Q15696 482 aaKnown RBP15.33■□□□□ 0.05
ABCA1-203ENST00000423487 CLPPQ16740 277 aaPredicted RBP15.33■□□□□ 0.05
ABCA1-203ENST00000423487 CLEC6AQ6EIG7 209 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 ZNF425Q6IV72 752 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 MED27Q6P2C8 311 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 WDR74Q6RFH5 385 aaPredicted RBP15.33■□□□□ 0.05
ABCA1-203ENST00000423487 USP53Q70EK8 1073 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 ASCL5Q7RTU5 278 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 CPLX4Q7Z7G2 160 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 TRIM73Q86UV7 250 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 CARFQ8N187 725 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 TBC1D19Q8N5T2 526 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 BAHD1Q8TBE0 780 aaPredicted RBP15.33■□□□□ 0.05
ABCA1-203ENST00000423487 REPS1Q96D71 796 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 TGM7Q96PF1 710 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 PHOX2BQ99453 314 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 DPYSL5Q9BPU6 564 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 PLCD4Q9BRC7 762 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 TRIM55Q9BYV6 548 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 LRRN3Q9H3W5 708 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 ELOVL6Q9H5J4 265 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 TIMM22Q9Y584 194 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 KLK4Q9Y5K2 254 aa15.33■□□□□ 0.05
ABCA1-203ENST00000423487 TLCD2A6NGC4 264 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 TMEM233B4DJY2 109 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 H0YIV9 168 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 FFAR3O14843 346 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 HDAC3O15379 428 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 GPR42O15529 346 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 CBFA2T3O75081 653 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 CPNE6O95741 557 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 MAGP20916 626 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 SERPINB3P29508 390 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 GFERP55789 205 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 REEP5Q00765 189 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 C10orf62Q5T681 223 aaPredicted RBP15.33■□□□□ 0.04
ABCA1-203ENST00000423487 FIGLAQ6QHK4 219 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 TMIGD1Q6UXZ0 262 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 SIKE1Q9BRV8 207 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 FAM107BQ9H098 131 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 SEMA6CQ9H3T2 930 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 NT5DC2Q9H857 520 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 PFDN4Q9NQP4 134 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 DNAJC15Q9Y5T4 150 aa15.33■□□□□ 0.04
ABCA1-203ENST00000423487 COL5A1P20908 1838 aaPredicted RBP15.32■□□□□ 0.04
ABCA1-203ENST00000423487 DMDP11532 3685 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 MN1Q10571 1320 aaPredicted RBP15.32■□□□□ 0.04
ABCA1-203ENST00000423487 A0A1W2PQM1 296 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 OR2A25A4D2G3 310 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 ULK1O75385 1050 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 C9P02748 559 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 DRD4P21917 467 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 LSSP48449 732 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 LIMK1P53667 647 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 CCL7P80098 99 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 CBX1P83916 185 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 MEF2AQ02078 507 aaPredicted RBP15.32■□□□□ 0.04
ABCA1-203ENST00000423487 RELAQ04206 551 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 IFT88Q13099 833 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 UGT3A2Q3SY77 523 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 FRG2Q64ET8 278 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 TMEM71Q6P5X7 295 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 FAM92BQ6ZTR7 304 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 PAQR7Q86WK9 346 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 LAS2Q8IYD9 372 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 TWIST2Q8WVJ9 160 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 CCT6BQ92526 530 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 PPM1MQ96MI6 270 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 FRG2BQ96QU4 278 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 MAP3K3Q99759 626 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 CCT7Q99832 543 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 KLHL20Q9Y2M5 609 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 USH1CQ9Y6N9 552 aa15.32■□□□□ 0.04
ABCA1-203ENST00000423487 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.31■□□□□ 0.04
ABCA1-203ENST00000423487 TRBC2A0A5B9 178 aa15.31■□□□□ 0.04
ABCA1-203ENST00000423487 TRPC5OSA6NMA1 111 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms