RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ALBP02768 609 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 ERVK-10P10266 1014 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 PIM1P11309 404 aaPredicted RBP14.49□□□□□ -0.09
USB1-202ENST00000423271 ENO3P13929 434 aaPredicted RBP14.49□□□□□ -0.09
USB1-202ENST00000423271 MMP11P24347 488 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 DEKP35659 375 aaKnown RBP14.49□□□□□ -0.09
USB1-202ENST00000423271 ARF3P61204 181 aaPredicted RBP14.49□□□□□ -0.09
USB1-202ENST00000423271 TIAL1Q01085 375 aaKnown RBP eCLIP14.49□□□□□ -0.09
USB1-202ENST00000423271 TAP2Q03519 686 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 UBAP2LQ14157 1087 aaKnown RBP14.49□□□□□ -0.09
USB1-202ENST00000423271 MYBPC3Q14896 1274 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 PRTGQ2VWP7 1150 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 FAM214AQ32MH5 1076 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 LRRC56Q8IYG6 542 aaPredicted RBP14.49□□□□□ -0.09
USB1-202ENST00000423271 FBXO15Q8NCQ5 510 aaPredicted RBP14.49□□□□□ -0.09
USB1-202ENST00000423271 LRRN4CLQ8ND94 238 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 FBXO36Q8NEA4 188 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 FBXO25Q8TCJ0 367 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 CALML6Q8TD86 181 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 LRRC39Q96DD0 335 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 NAT9Q9BTE0 207 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 ZNF552Q9H707 407 aaPredicted RBP14.49□□□□□ -0.09
USB1-202ENST00000423271 L2HGDHQ9H9P8 463 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 ANKMY1Q9P2S6 941 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 SLC17A6Q9P2U8 582 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 FBXL4Q9UKA2 621 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 MAP4K5Q9Y4K4 846 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 HS3ST3B1Q9Y662 390 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 COMMD10Q9Y6G5 202 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 MAST4O15021 2626 aa14.49□□□□□ -0.09
USB1-202ENST00000423271 USP9YO00507 2555 aaPredicted RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 CNTRLQ7Z7A1 2325 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 VSTM2BA6NLU5 285 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 VPS26AO75436 327 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 TTC4O95801 387 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 IGHEP01854 428 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 GNLYP22749 145 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 GABRB3P28472 473 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 IMPA1P29218 277 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 HSD17B2P37059 387 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 SKIV2L2P42285 1042 aaKnown RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 CAV1Q03135 178 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 PRDX1Q06830 199 aaKnown RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 CBLBQ13191 982 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 NAA25Q14CX7 972 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 HKDC1Q2TB90 917 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 GLE1Q53GS7 698 aaKnown RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 SPANXN3Q5MJ09 141 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 RBM20Q5T481 1227 aaKnown RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 STEAP4Q687X5 459 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 ZNF425Q6IV72 752 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 UBE2R2Q712K3 238 aaPredicted RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 PRSS58Q8IYP2 241 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 EFCAB3Q8N7B9 438 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 C2CD4AQ8NCU7 369 aaPredicted RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 COL26A1Q96A83 441 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 PNPLA2Q96AD5 504 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 CABS1Q96KC9 395 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 ZBTB20Q9HC78 741 aaPredicted RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 ZNF304Q9HCX3 659 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 CUEDC1Q9NWM3 386 aaPredicted RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 C5AR2Q9P296 337 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 TRMT6Q9UJA5 497 aaKnown RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 ADAMTS6Q9UKP5 1117 aa14.48□□□□□ -0.09
USB1-202ENST00000423271 RUVBL1Q9Y265 456 aaKnown RBP14.48□□□□□ -0.09
USB1-202ENST00000423271 NAV2Q8IVL1 2488 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 ZNF839A8K0R7 811 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 FFAR3O14843 346 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 HAT1O14929 419 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 GPR42O15529 346 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 P2RX6O15547 441 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 CCNDBP1O95273 360 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 ITGA3P26006 1051 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 CDKN2DP55273 166 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 INPP5JQ15735 1006 aaPredicted RBP14.47□□□□□ -0.09
USB1-202ENST00000423271 RBBP7Q16576 425 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 MUM1Q2TAK8 710 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 KIRREL2Q6UWL6 708 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 MBOAT1Q6ZNC8 495 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 ADCK2Q7Z695 626 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 HPS6Q86YV9 775 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 PLD3Q8IV08 490 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 ZBED8Q8IZ13 594 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 CSNK1A1LQ8N752 337 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 STT3BQ8TCJ2 826 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 OR2A5Q96R48 311 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 CRB3Q9BUF7 120 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 SAYSD1Q9NPB0 183 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 ATP13A2Q9NQ11 1180 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 SLAMF7Q9NQ25 335 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 ZDHHC18Q9NUE0 388 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 NXT1Q9UKK6 140 aaKnown RBP14.47□□□□□ -0.09
USB1-202ENST00000423271 SPTBN1Q01082 2364 aaKnown RBP14.47□□□□□ -0.09
USB1-202ENST00000423271 ESPL1Q14674 2120 aa14.47□□□□□ -0.09
USB1-202ENST00000423271 NBPF19A0A087WUL8 3843 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 EIF3HO15372 352 aaKnown RBP eCLIP14.46□□□□□ -0.09
USB1-202ENST00000423271 ZBTB14O43829 449 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 VPS4BO75351 444 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 STATHP02808 62 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 ALPPP05187 535 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms