RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 GPR89BP0CG08 455 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ACSL1P33121 698 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 FOXK1P85037 733 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 SCN1BQ07699 218 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 GPR153Q6NV75 609 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PAQR3Q6TCH7 311 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 BEND4Q6ZU67 534 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 RASGEF1CQ8N431 466 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 MMABQ96EY8 250 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 C12orf65Q9H3J6 166 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 FTSJ1Q9UET6 329 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 FZD4Q9ULV1 537 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ARPC4P59998 168 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 FOXR2Q6PJQ5 311 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 DENND6BQ8NEG7 585 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 POLR2J3Q9H1A7 115 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 TLL2Q9Y6L7 1015 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 VIRMAQ69YN4 1812 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 SLIT3O75094 1523 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 FAM237AA0A1B0GTK4 181 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 DNAJA1P31689 397 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 C4orf46Q504U0 113 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 THOC6Q86W42 341 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 RBM15BQ8NDT2 890 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 RBPJLQ9UBG7 517 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 BCL9LQ86UU0 1499 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 CBSLP0DN79 551 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 MTHFD1P11586 935 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 NR2C1P13056 603 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PRPS1L1P21108 318 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 NR4A1P22736 598 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 CBSP35520 551 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 RPS21P63220 83 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ARHGAP1Q07960 439 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 TMEM44Q2T9K0 475 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ZFP69Q49AA0 526 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 SLC9A4Q6AI14 798 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF565Q8N9K5 539 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PCDH19Q8TAB3 1148 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 TFGQ92734 400 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 CNDP2Q96KP4 475 aaKnown RBP10.93□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF599Q96NL3 588 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 KCNC2Q96PR1 638 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 NODALQ96S42 347 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PADI2Q9Y2J8 665 aa10.93□□□□□ -0.66
PTCH1-205ENST00000418258 PRAMEF33A0A0G2JMD5 474 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 PRAMEF10O60809 474 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 BMP8BP34820 402 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 KCNQ1P51787 676 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CCNHP51946 323 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 MRPL49Q13405 166 aaKnown RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 PRAMEF17Q5VTA0 474 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 SYPL2Q5VXT5 272 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 BMP8AQ7Z5Y6 402 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 RAB43Q86YS6 212 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 INO80EQ8NBZ0 244 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 NKD2Q969F2 451 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 XRN1Q8IZH2 1706 aaKnown RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 HAS3O00219 553 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CBLP22681 906 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 AP2S1P53680 142 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 JAM2P57087 298 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ELOCQ15369 112 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ITPRIPL2Q3MIP1 535 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 KLHL36Q8N4N3 616 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CBR4Q8N4T8 237 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 LRTOMTQ8WZ04 291 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 LENG8Q96PV6 779 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 WASF2Q9Y6W5 498 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CAPN8A6NHC0 703 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 GRXCR1A8MXD5 290 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 RNF13O43567 381 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 TRMUO75648 421 aaKnown RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 KLF8O95600 359 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 FHP07954 510 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 MATN1P21941 496 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 PREPP48147 710 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 DUSP3P51452 185 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 PITRM1Q5JRX3 1037 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF598Q86UK7 904 aaKnown RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 FEM1AQ9BSK4 669 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 TFB2MQ9H5Q4 396 aaKnown RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 INSL5Q9Y5Q6 135 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CDK5RAP2Q96SN8 1893 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 SAGE2PA6NJ88 616 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 AGPSO00116 658 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ITGA10O75578 1167 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CDC123O75794 336 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 C8orf89P0DMQ9 161 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 PRKCDQ05655 676 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ODF4Q2M2E3 257 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 DPY19L1Q2PZI1 675 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 FBXL22Q6P050 247 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CEACAM20Q6UY09 585 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF782Q6ZMW2 699 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CENPNQ96H22 339 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 RBCK1Q9BYM8 510 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 SLC45A1Q9Y2W3 748 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 TEX13CA0A0J9YWL9 993 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 A0A1W2PPL8 197 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms