RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CNN3Q15417 329 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 CHRNA6Q15825 494 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 CAMK4Q16566 473 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 CCDC142Q17RM4 750 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 TMEM95Q3KNT9 176 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 C5orf22Q49AR2 442 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 CLVS2Q5SYC1 327 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 VWA5B1Q5TIE3 1220 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 AGAP7PQ5VUJ5 663 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 PLBD1Q6P4A8 553 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 FAM180AQ6UWF9 173 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 VSTM1Q6UX27 236 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 C4orf50Q6ZRC1 276 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 USP43Q70EL4 1123 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 IKBIPQ70UQ0 350 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 KDELC2Q7Z4H8 507 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 PARGQ86W56 976 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC22A18ASQ8N1D0 253 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 LIX1Q8N485 282 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 SH2D3CQ8N5H7 860 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 LILRA3Q8N6C8 439 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 OR52K2Q8NGK3 314 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 TBCKQ8TEA7 893 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 FNIP1Q8TF40 1166 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 NOC3LQ8WTT2 800 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF606Q8WXB4 792 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 PGM2Q96G03 612 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 CLPTM1LQ96KA5 538 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 NT5C1BQ96P26 610 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 MYOCQ99972 504 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 DESI2Q9BSY9 194 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 DCLK3Q9C098 648 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 VPS11Q9H270 941 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 HSD3B7Q9H2F3 369 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 EHD1Q9H4M9 534 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF696Q9H7X3 374 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 MARCH7Q9H992 704 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 MLXIPLQ9NP71 852 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 MRGBPQ9NV56 204 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 GPRC5BQ9NZH0 403 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 EXTL2Q9UBQ6 330 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 TEKT2Q9UIF3 430 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 FBXO2Q9UK22 296 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 PILRAQ9UKJ1 303 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 VWA7Q9Y334 891 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF175Q9Y473 711 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 MRPS18BQ9Y676 258 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 CACNG2Q9Y698 323 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 RNF215Q9Y6U7 377 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 PMF1-BGLAPU3KQ54 211 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 TACC2O95359 2948 aa5.35□□□□□ -1.55
ECHDC1-206ENST00000417628 ILVBLA1L0T0 632 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 GRID2IPA4D2P6 1211 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ARHGEF35A5YM69 484 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ZSCAN5BA6NJL1 495 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 PLOD2O00469 737 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 DDX3XO00571 662 aaKnown RBP eCLIP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 PIRO00625 290 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 KPNA4O00629 521 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 HDAC3O15379 428 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC16A6O15403 523 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 SLC37A4O43826 429 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 MFAP3LO75121 409 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 PHF2O75151 1096 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ENDOD1O94919 500 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ASS1P00966 412 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 AMY1AP04745 511 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ANXA6P08133 673 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 STSP08842 583 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 FAM228BP0C875 321 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 MYBL1P10243 752 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 FGF3P11487 239 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 KRT3P12035 628 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF18P17022 549 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 PEX2P28328 305 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ECHS1P30084 290 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 STAT1P42224 750 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 MMP13P45452 471 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 PSMD8P48556 350 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ARHGDIBP52566 201 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 STX17P56962 302 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 NKX6-1P78426 367 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ASPHQ12797 758 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 PCOLCEQ15113 449 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 CEBPEQ15744 281 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 KCNJ8Q15842 424 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 DUSP7Q16829 419 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 PFKFB3Q16875 520 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 EDRF1Q3B7T1 1238 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ALFQ53S48 1182 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 IGSF11Q5DX21 431 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ATAD3BQ5T9A4 648 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 RINT1Q6NUQ1 792 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 MOXD1Q6UVY6 613 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 LINGO4Q6UY18 593 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 MRGPRGQ86SM5 289 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 TMEM135Q86UB9 458 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 MB21D2Q8IYB1 491 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms