RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 C1SP09871 688 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 CBSLP0DN79 551 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 CDH3P22223 829 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 HLA-FP30511 346 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 CA8P35219 290 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 CBSP35520 551 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 KRT20P35900 424 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 HPCAL1P37235 193 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 IRF8Q02556 426 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 DNASE1L3Q13609 305 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 XKR6Q5GH73 641 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 AHSA2Q719I0 299 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 RNF168Q8IYW5 571 aaPredicted RBP14.02□□□□□ -0.16
HDAC9-208ENST00000417496 LMNTD1Q8N9Z9 388 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 NELL1Q92832 810 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 ALPK1Q96QP1 1244 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 BRD9Q9H8M2 597 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 TM9SF3Q9HD45 589 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 KRT84Q9NSB2 600 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 TMEM184CQ9NVA4 438 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 DNAJC11Q9NVH1 559 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 THUMPD1Q9NXG2 353 aaKnown RBP14.02□□□□□ -0.16
HDAC9-208ENST00000417496 B4GALT6Q9UBX8 382 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 AP3M1Q9Y2T2 418 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 ANAPC1Q9H1A4 1944 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 E7EQ34 232 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 SERPINB7O75635 380 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 EPN2O95208 641 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 VIPP01282 170 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 INHAP05111 366 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 ABCB1P08183 1280 aaPredicted RBP14.02□□□□□ -0.17
HDAC9-208ENST00000417496 IL1RNP18510 177 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 ACVR2AP27037 513 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 TPP2P29144 1249 aaPredicted RBP14.02□□□□□ -0.17
HDAC9-208ENST00000417496 DNAJA1P31689 397 aaKnown RBP14.02□□□□□ -0.17
HDAC9-208ENST00000417496 ATN1P54259 1190 aaPredicted RBP14.02□□□□□ -0.17
HDAC9-208ENST00000417496 RPP38P78345 283 aaKnown RBP14.02□□□□□ -0.17
HDAC9-208ENST00000417496 MVKQ03426 396 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 GPR153Q6NV75 609 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 METTL2BQ6P1Q9 378 aaKnown RBP14.02□□□□□ -0.17
HDAC9-208ENST00000417496 USP45Q70EL2 814 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 P2RY8Q86VZ1 359 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 DNAJB8Q8NHS0 232 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 TAMM41Q96BW9 452 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 MED8Q96G25 268 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 PALMDQ9NP74 551 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 POLE4Q9NR33 117 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 NDRG4Q9ULP0 352 aaKnown RBP14.02□□□□□ -0.17
HDAC9-208ENST00000417496 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.02□□□□□ -0.17
HDAC9-208ENST00000417496 TPRKBQ9Y3C4 175 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 INSL5Q9Y5Q6 135 aa14.02□□□□□ -0.17
HDAC9-208ENST00000417496 MYOFQ9NZM1 2061 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 KRBA1A5PL33 1030 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 PABPN1LA6NDY0 278 aaKnown RBP14.01□□□□□ -0.17
HDAC9-208ENST00000417496 FAM20BO75063 409 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 GBAP04062 536 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 ATP1B2P14415 290 aaPredicted RBP14.01□□□□□ -0.17
HDAC9-208ENST00000417496 GPX2P18283 190 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 PRPS1L1P21108 318 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 EPHB3P54753 998 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 IL18R1Q13478 541 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 SYT16Q17RD7 645 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 RBM12BQ8IXT5 1001 aaKnown RBP14.01□□□□□ -0.17
HDAC9-208ENST00000417496 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 SETD9Q8NE22 299 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 GPR156Q8NFN8 814 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 ELMO1Q92556 727 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 ZNF566Q969W8 418 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 HHIPQ96QV1 700 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 TPT1P8Q9HAU6 139 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 AKIP1Q9NQ31 210 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 PCDHGB1Q9Y5G3 927 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 UNC80Q8N2C7 3258 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 WBP4O75554 376 aaKnown RBP14.01□□□□□ -0.17
HDAC9-208ENST00000417496 OPN1SWP03999 348 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 SOD2P04179 222 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 BMP4P12644 408 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 ACPPP15309 386 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 FPR1P21462 350 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 C21orf33P30042 268 aaPredicted RBP14.01□□□□□ -0.17
HDAC9-208ENST00000417496 SPINT3P49223 89 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 MTAPQ13126 283 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 MAD2L1BPQ15013 274 aaPredicted RBP14.01□□□□□ -0.17
HDAC9-208ENST00000417496 POM121L1PQ3SYA9 428 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 GGTA1PQ4G0N0 100 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 CYP27C1Q4G0S4 372 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 Q6ZVU0 165 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 ZBTB8BQ8NAP8 495 aaPredicted RBP14.01□□□□□ -0.17
HDAC9-208ENST00000417496 YIPF6Q96EC8 236 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 KCNC2Q96PR1 638 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 LYSMD1Q96S90 227 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 ACOT13Q9NPJ3 140 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 INIPQ9NRY2 104 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 SCN3BQ9NY72 215 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 VPS29Q9UBQ0 182 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 SH3BP1Q9Y3L3 701 aa14.01□□□□□ -0.17
HDAC9-208ENST00000417496 SCN5AQ14524 2016 aa14□□□□□ -0.17
HDAC9-208ENST00000417496 GABRR3A8MPY1 467 aa14□□□□□ -0.17
HDAC9-208ENST00000417496 GFYI3L273 518 aa14□□□□□ -0.17
HDAC9-208ENST00000417496 NUAK1O60285 661 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms