RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 IGKV1-8A0A0C4DH67 115 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 BLACEA4D250 179 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 MED26O95402 600 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 SYF2O95926 243 aaKnown RBP24.13■■□□□ 1.45
VEGFA-208ENST00000417285 FBLP22087 321 aaKnown RBP24.13■■□□□ 1.45
VEGFA-208ENST00000417285 HRH2P25021 359 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 IGFL2Q6UWQ7 119 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 CISD2Q8N5K1 135 aaKnown RBP24.13■■□□□ 1.45
VEGFA-208ENST00000417285 CSNK1A1LQ8N752 337 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 C2CD4AQ8NCU7 369 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-208ENST00000417285 CD200R1Q8TD46 325 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 C19orf60Q96EN9 201 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 C10orf90Q96M02 699 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 NAPGQ99747 312 aaPredicted RBP24.13■■□□□ 1.45
VEGFA-208ENST00000417285 TRMT6Q9UJA5 497 aaKnown RBP24.13■■□□□ 1.45
VEGFA-208ENST00000417285 C3orf18Q9UK00 162 aa24.13■■□□□ 1.45
VEGFA-208ENST00000417285 COPG1Q9Y678 874 aaKnown RBP24.13■■□□□ 1.45
VEGFA-208ENST00000417285 SMAPO00193 183 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 DSG2Q14126 1118 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 BBS9Q3SYG4 887 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 ATG9BQ674R7 924 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 KLHL7Q8IXQ5 586 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 PARP9Q8IXQ6 854 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 CPNE9Q8IYJ1 553 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 DTWD1Q8N5C7 304 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 MCOLN3Q8TDD5 553 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 PDLIM2Q96JY6 352 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 WDR77Q9BQA1 342 aaPredicted RBP24.12■■□□□ 1.45
VEGFA-208ENST00000417285 SAR1BQ9Y6B6 198 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 CNTRLQ7Z7A1 2325 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 SHANK1Q9Y566 2161 aa24.12■■□□□ 1.45
VEGFA-208ENST00000417285 SPENQ96T58 3664 aaKnown RBP24.12■■□□□ 1.45
VEGFA-208ENST00000417285 PCDH17O14917 1159 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 HPP00738 406 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 ACPPP15309 386 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 IVDP26440 423 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 DR1Q01658 176 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 MORF4L2Q15014 288 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 CRB2Q5IJ48 1285 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 THEMIS2Q5TEJ8 643 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 UBE2R2Q712K3 238 aaPredicted RBP24.11■■□□□ 1.45
VEGFA-208ENST00000417285 CREG2Q8IUH2 290 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 LRRC56Q8IYG6 542 aaPredicted RBP24.11■■□□□ 1.45
VEGFA-208ENST00000417285 PDIK1LQ8N165 341 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 PPP4R1Q8TF05 950 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 SSC4DQ8WTU2 575 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 LMF1Q96S06 567 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 PCBD2Q9H0N5 130 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 ZBTB20Q9HC78 741 aaPredicted RBP24.11■■□□□ 1.45
VEGFA-208ENST00000417285 ASF1BQ9NVP2 202 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 STOX2Q9P2F5 926 aaPredicted RBP24.11■■□□□ 1.45
VEGFA-208ENST00000417285 TRPC4Q9UBN4 977 aa24.11■■□□□ 1.45
VEGFA-208ENST00000417285 RUVBL1Q9Y265 456 aaKnown RBP24.11■■□□□ 1.45
VEGFA-208ENST00000417285 PCM1Q15154 2024 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 BANF1O75531 89 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 ANXA5P08758 320 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 SLC26A3P40879 764 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 PAFAH1B1P43034 410 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 GLRBP48167 497 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 RGS4P49798 205 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 FAM53BQ14153 422 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 EIF2S3LQ2VIR3 472 aaKnown RBP24.1■■□□□ 1.45
VEGFA-208ENST00000417285 MSS51Q4VC12 460 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 KIAA0408Q6ZU52 694 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 PALM2Q8IXS6 379 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 PPFIBP2Q8ND30 876 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 DNAJB14Q8TBM8 379 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 THOC3Q96J01 351 aaKnown RBP24.1■■□□□ 1.45
VEGFA-208ENST00000417285 CCDC138Q96M89 665 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 BARD1Q99728 777 aaKnown RBP24.1■■□□□ 1.45
VEGFA-208ENST00000417285 YIPF2Q9BWQ6 316 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 TGIF2Q9GZN2 237 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 EPS8L2Q9H6S3 715 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 MKKSQ9NPJ1 570 aaPredicted RBP24.1■■□□□ 1.45
VEGFA-208ENST00000417285 TMEM184CQ9NVA4 438 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 C14orf105Q9NVL8 296 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 TAS2R13Q9NYV9 303 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 PCDHGA10Q9Y5H3 936 aa24.1■■□□□ 1.45
VEGFA-208ENST00000417285 CCDC188H7C350 402 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 MAP2K7O14733 419 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 CBX6O95503 412 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 DDAH2O95865 285 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 CXCR2P25025 360 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 EMP2P54851 167 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 NDUFA9Q16795 377 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 HKDC1Q2TB90 917 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 VWA2Q5GFL6 755 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 NDUFAF7Q7L592 441 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 PIWIL4Q7Z3Z4 852 aaKnown RBP24.09■■□□□ 1.45
VEGFA-208ENST00000417285 ADCK2Q7Z695 626 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 CUZD1Q86UP6 607 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 CNTN4Q8IWV2 1026 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 PRSS58Q8IYP2 241 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 PRR7Q8TB68 274 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 CERS2Q96G23 380 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 NDNQ99608 321 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 DRC3Q9H069 523 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 AGPAT4Q9NRZ5 378 aa24.09■■□□□ 1.45
VEGFA-208ENST00000417285 KCNE1BA0A087WTH5 132 aa24.08■■□□□ 1.45
VEGFA-208ENST00000417285 H7BY64 318 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms