RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TTC29Q8NA56 475 aaPredicted RBP22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 ABHD11Q8NFV4 315 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 ACMSDQ8TDX5 336 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 RERGQ96A58 199 aaPredicted RBP22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 GPR78Q96P69 363 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 OR4K3Q96R72 315 aa22.12■■□□□ 1.13
SMARCB1-205ENST00000417137 ASPMQ8IZT6 3477 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 H3BMH7 237 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 TXNDC9O14530 226 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 CDH16O75309 829 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 RFPL1O75677 317 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 STK16O75716 305 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 WDR47O94967 919 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 NUDT17P0C025 328 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 CDH1P12830 882 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 SLC6A12P48065 614 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 RPS15AP62244 130 aaKnown RBP22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 TLE3Q04726 772 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 FAM214AQ32MH5 1076 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 WASHC2DQ5SRD0 308 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 PRAMEF17Q5VTA0 474 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 ZNF655Q8N720 491 aaPredicted RBP22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 SLC5A11Q8WWX8 675 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 THAP11Q96EK4 314 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 SCYL1Q96KG9 808 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 ZNF285Q96NJ3 590 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 ENAMQ9NRM1 1142 aa22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 URB1O60287 2271 aaKnown RBP22.11■■□□□ 1.13
SMARCB1-205ENST00000417137 TEX51A0A1B0GUA7 166 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 UBXN8O00124 270 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 MAP2K7O14733 419 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 TAPBPO15533 448 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 APC2O95996 2303 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 GNAZP19086 355 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 ITPKBP27987 946 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 SLCO1A2P46721 670 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 CSNK1G2P78368 415 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 COL9A2Q14055 689 aaPredicted RBP22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 FRMPD2BQ6IN97 320 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 PLD6Q8N2A8 252 aaKnown RBP22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 MREGQ8N565 214 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 RNF31Q96EP0 1072 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 DPH2Q9BQC3 489 aaPredicted RBP22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 LHX9Q9NQ69 397 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 TXLNGQ9NUQ3 528 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 DNAJC11Q9NVH1 559 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 GPRC5BQ9NZH0 403 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 BAHCC1Q9P281 2608 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 TMCO1Q9UM00 188 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 SSUH2Q9Y2M2 353 aa22.1■■□□□ 1.13
SMARCB1-205ENST00000417137 ACACAQ13085 2346 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 KCNE1BA0A087WTH5 132 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 LOC105369274A0A096LPK9 316 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 LOC102723532A0A0G2JNH3 316 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 SMIM23A6NLE4 172 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 H0YGG7 62 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 MEN1O00255 615 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 HAT1O14929 419 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 NRP2O60462 931 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 H2AFYO75367 372 aaKnown RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 EIF2S1P05198 315 aaKnown RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 GFAPP14136 432 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 KRT15P19012 456 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 AGXTP21549 392 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 STAT5AP42229 794 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 GDF5P43026 501 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 HSPA7P48741 367 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 ARF3P61204 181 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 NAA30Q147X3 362 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 C18orf21Q32NC0 220 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 RHBDD2Q6NTF9 364 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 OR4N4Q8N0Y3 316 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 SLC38A9Q8NBW4 561 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 OR4K1Q8NGD4 311 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 PROKR1Q8TCW9 393 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 HNRNPLLQ8WVV9 542 aaKnown RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 MR1Q95460 341 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 NEIL2Q969S2 332 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 OR2A5Q96R48 311 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 MRPL57Q9BQC6 102 aaKnown RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 TMEM79Q9BSE2 394 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 NLNQ9BYT8 704 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 CD244Q9BZW8 370 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 ROPN1BQ9BZX4 212 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 GPN2Q9H9Y4 310 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 ROPN1Q9HAT0 212 aaPredicted RBP22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 PELI2Q9HAT8 420 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 PCMTD2Q9NV79 361 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 SH2B3Q9UQQ2 575 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 ADAMTS20P59510 1910 aa22.09■■□□□ 1.13
SMARCB1-205ENST00000417137 TLDC2A0PJX2 215 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 FITM1A5D6W6 292 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 CCNT2O60583 730 aaKnown RBP22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 TMPRSS3P57727 454 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 CDC16Q13042 620 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 GPS2Q13227 327 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 TECRLQ5HYJ1 363 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 NXPE4Q6UWF7 544 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 CCDC81Q6ZN84 652 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 DSELQ8IZU8 1212 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms