RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 MCOLN3Q8TDD5 553 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 MIEF2Q96C03 454 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 CCDC138Q96M89 665 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 PRAP1Q96NZ9 151 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 MESP1Q9BRJ9 268 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 PARVBQ9HBI1 364 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 TMEM184CQ9NVA4 438 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 CUEDC1Q9NWM3 386 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-210ENST00000416778 TAS2R13Q9NYV9 303 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 TRMT6Q9UJA5 497 aaKnown RBP17.02■□□□□ 0.32
CPNE1-210ENST00000416778 CDC14AQ9UNH5 594 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 B3GNT3Q9Y2A9 372 aa17.02■□□□□ 0.32
CPNE1-210ENST00000416778 USP9YO00507 2555 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-210ENST00000416778 KCNE1BA0A087WTH5 132 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 TP73O15350 636 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 FOXS1O43638 330 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 ALOX12BO75342 701 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 IPO13O94829 963 aaKnown RBP17.01■□□□□ 0.31
CPNE1-210ENST00000416778 ALPPP05187 535 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 ELK3P41970 407 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 UQCRFS1P47985 274 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 GNG11P61952 73 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 Q0VFX4 171 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 MORF4L2Q15014 288 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 PRR30Q53SZ7 412 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-210ENST00000416778 HP1BP3Q5SSJ5 553 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-210ENST00000416778 RBM20Q5T481 1227 aaKnown RBP17.01■□□□□ 0.31
CPNE1-210ENST00000416778 HIBCHQ6NVY1 386 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-210ENST00000416778 GALNT7Q86SF2 657 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 KLHL7Q8IXQ5 586 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 PARP9Q8IXQ6 854 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 C19orf60Q96EN9 201 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 MVB12AQ96EY5 273 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 CAPZA3Q96KX2 299 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 ABCF3Q9NUQ8 709 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 DOPEY2Q9Y3R5 2298 aa17.01■□□□□ 0.31
CPNE1-210ENST00000416778 TCP11X1B4DZS4 312 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 TXNDC9O14530 226 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 HAT1O14929 419 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 SLC16A5O15375 505 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 TSPAN12O95859 305 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 C8GP07360 202 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 HRH2P25021 359 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 ITGA3P26006 1051 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 VARSP26640 1264 aaKnown RBP17■□□□□ 0.31
CPNE1-210ENST00000416778 SNRPNP63162 240 aaKnown RBP17■□□□□ 0.31
CPNE1-210ENST00000416778 DSG2Q14126 1118 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 RBBP7Q16576 425 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 ZXDCQ2QGD7 858 aaPredicted RBP17■□□□□ 0.31
CPNE1-210ENST00000416778 THEMIS2Q5TEJ8 643 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 LRRC8EQ6NSJ5 796 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 IGFL2Q6UWQ7 119 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 Q6ZS92 163 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 PLD3Q8IV08 490 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 PRSS58Q8IYP2 241 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 PDIK1LQ8N165 341 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 ZADH2Q8N4Q0 377 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 AMER3Q8N944 861 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 GABPB2Q8TAK5 448 aaPredicted RBP17■□□□□ 0.31
CPNE1-210ENST00000416778 RERGQ96A58 199 aaPredicted RBP17■□□□□ 0.31
CPNE1-210ENST00000416778 SNRNP40Q96DI7 357 aaKnown RBP17■□□□□ 0.31
CPNE1-210ENST00000416778 CERS2Q96G23 380 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 PDLIM2Q96JY6 352 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 WDR83Q9BRX9 315 aaKnown RBP17■□□□□ 0.31
CPNE1-210ENST00000416778 CRB3Q9BUF7 120 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 C3orf18Q9UK00 162 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 VWA7Q9Y334 891 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 SAR1BQ9Y6B6 198 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 TEX264Q9Y6I9 313 aa17■□□□□ 0.31
CPNE1-210ENST00000416778 UTP20O75691 2785 aaKnown RBP16.99■□□□□ 0.31
CPNE1-210ENST00000416778 NPPBP16860 134 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 FBLP22087 321 aaKnown RBP16.99■□□□□ 0.31
CPNE1-210ENST00000416778 RGS4P49798 205 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 PGGT1BP53609 377 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 DR1Q01658 176 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 FAM53BQ14153 422 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 TUBB8Q3ZCM7 444 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 TRMT10BQ6PF06 316 aaKnown RBP16.99■□□□□ 0.31
CPNE1-210ENST00000416778 AGTRAPQ6RW13 159 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 CISD2Q8N5K1 135 aaKnown RBP16.99■□□□□ 0.31
CPNE1-210ENST00000416778 RUNDC3BQ96NL0 473 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 PSMG3-AS1Q96PY0 264 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 TGIF2Q9GZN2 237 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 PCBD2Q9H0N5 130 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 ATG10Q9H0Y0 220 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 SLC17A6Q9P2U8 582 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 TRPC4Q9UBN4 977 aa16.99■□□□□ 0.31
CPNE1-210ENST00000416778 HEATR5BQ9P2D3 2071 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 MAST4O15021 2626 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 A0A0A6YYC8 382 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-210ENST00000416778 I3L1I5 382 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-210ENST00000416778 FFAR3O14843 346 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 GPR42O15529 346 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 P2RX6O15547 441 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 ITGA8P53708 1063 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 EMP2P54851 167 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 CSNK1G2P78368 415 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 CBLBQ13191 982 aa16.98■□□□□ 0.31
CPNE1-210ENST00000416778 NAE1Q13564 534 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms