RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 INTS10Q9NVR2 710 aaKnown RBP13.72□□□□□ -0.21
PAF1-202ENST00000416728 SAMD15Q9P1V8 674 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 PCYOX1Q9UHG3 505 aa13.72□□□□□ -0.21
PAF1-202ENST00000416728 IGHV1-45A0A0A0MS14 117 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 TRAV17A0A0B4J275 112 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 A0A1W2PQ72 361 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 SMAPO00193 183 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 TXNDC9O14530 226 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 PCDH17O14917 1159 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 CEP104O60308 925 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 AVILO75366 819 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 BMP10O95393 424 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 SLC16A8O95907 504 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 SOX11P35716 441 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 SLC26A3P40879 764 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 CLCN7P51798 805 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 KCNJ11Q14654 390 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 TRIP13Q15645 432 aaPredicted RBP13.71□□□□□ -0.21
PAF1-202ENST00000416728 KCTD19Q17RG1 926 aaPredicted RBP13.71□□□□□ -0.21
PAF1-202ENST00000416728 ZNF470Q6ECI4 717 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 ZNF425Q6IV72 752 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 NEK10Q6ZWH5 1172 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 SIRT6Q8N6T7 355 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 AMER3Q8N944 861 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 PPFIBP2Q8ND30 876 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 ZNF480Q8WV37 535 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 PSMF1Q92530 271 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 TGIF2Q9GZN2 237 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 CCDC68Q9H2F9 335 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 SYNPO2LQ9H987 977 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 ABCF3Q9NUQ8 709 aa13.71□□□□□ -0.21
PAF1-202ENST00000416728 A0A0A6YYC8 382 aaPredicted RBP13.71□□□□□ -0.22
PAF1-202ENST00000416728 CTAGE9A4FU28 777 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 ENO4A6NNW6 628 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 E7ENX8 843 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 I3L1I5 382 aaPredicted RBP13.71□□□□□ -0.22
PAF1-202ENST00000416728 JRKO75564 520 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 WFS1O76024 890 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 SYF2O95926 243 aaKnown RBP13.71□□□□□ -0.22
PAF1-202ENST00000416728 TNFSF10P50591 281 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 ABATP80404 500 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 TAP2Q03519 686 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 RELAQ04206 551 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 GPS1Q13098 491 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 THOC5Q13769 683 aaKnown RBP13.71□□□□□ -0.22
PAF1-202ENST00000416728 DHX34Q14147 1143 aaKnown RBP13.71□□□□□ -0.22
PAF1-202ENST00000416728 INAQ16352 499 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 THEMIS2Q5TEJ8 643 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 RIPOR1Q6ZS17 1223 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 FBXO15Q8NCQ5 510 aaPredicted RBP13.71□□□□□ -0.22
PAF1-202ENST00000416728 HAS2Q92819 552 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 ZNF669Q96BR6 464 aaPredicted RBP13.71□□□□□ -0.22
PAF1-202ENST00000416728 SLC30A3Q99726 388 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 PLA2G3Q9NZ20 509 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 KLHL42Q9P2K6 505 aa13.71□□□□□ -0.22
PAF1-202ENST00000416728 MYO9AB2RTY4 2548 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 CNTRLQ7Z7A1 2325 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.7□□□□□ -0.22
PAF1-202ENST00000416728 LOC102723996A0A087X1L8 192 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 A0A1B0GUH1 482 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 FAM237BA0A1B0GVD1 139 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 FOXS1O43638 330 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 ZG16O60844 167 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 STSP08842 583 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 CCDC175P0C221 793 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 ENO3P13929 434 aaPredicted RBP13.7□□□□□ -0.22
PAF1-202ENST00000416728 CXCR5P32302 372 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 MAGEA6P43360 314 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 AP2B1P63010 937 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 CUL1Q13616 776 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 FAM53BQ14153 422 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 ZRSR2Q15696 482 aaKnown RBP13.7□□□□□ -0.22
PAF1-202ENST00000416728 NDUFA9Q16795 377 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 SYT16Q17RD7 645 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 CAND1Q86VP6 1230 aaKnown RBP13.7□□□□□ -0.22
PAF1-202ENST00000416728 FJX1Q86VR8 437 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 ZC3H7AQ8IWR0 971 aaKnown RBP13.7□□□□□ -0.22
PAF1-202ENST00000416728 SLC34A3Q8N130 599 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 ARHGEF39Q8N4T4 335 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 PRELID2Q8N945 189 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 TRIM58Q8NG06 486 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 GIMAP7Q8NHV1 300 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 ASB11Q8WXH4 323 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 KCNJ9Q92806 393 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 EBNA1BP2Q99848 306 aaKnown RBP13.7□□□□□ -0.22
PAF1-202ENST00000416728 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.7□□□□□ -0.22
PAF1-202ENST00000416728 FBXO6Q9NRD1 293 aaPredicted RBP13.7□□□□□ -0.22
PAF1-202ENST00000416728 MKL2Q9ULH7 1088 aa13.7□□□□□ -0.22
PAF1-202ENST00000416728 MRPS2Q9Y399 296 aaKnown RBP13.7□□□□□ -0.22
PAF1-202ENST00000416728 DOCK10Q96BY6 2186 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 MAGEB16A2A368 324 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 SDR42E2A6NKP2 422 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 HAT1O14929 419 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 P2RX6O15547 441 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 ZBTB14O43829 449 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 F10P00742 488 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 KRT14P02533 472 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 CELA2AP08217 269 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 F7P08709 466 aaPredicted RBP13.69□□□□□ -0.22
PAF1-202ENST00000416728 MPC1LP0DKB6 136 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms