RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 SKA2Q8WVK7 121 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-203ENST00000415380 SLC38A4Q969I6 547 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 C19orf43Q9BQ61 176 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 KLHL25Q9H0H3 589 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 EPS8L2Q9H6S3 715 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 ZBTB20Q9HC78 741 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-203ENST00000415380 STOML2Q9UJZ1 356 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-203ENST00000415380 KRT87PA6NCN2 255 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 NPIPB8E9PQR5 432 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 C9P02748 559 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 COL6A1P12109 1028 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 SLC6A12P48065 614 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 B4GALNT1Q00973 533 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 PLD1Q13393 1074 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 IQCCQ4KMZ1 466 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 PRSS36Q5K4E3 855 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 FRG2Q64ET8 278 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 CYP2U1Q7Z449 544 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 CSGALNACT1Q8TDX6 532 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 TPD52L3Q96J77 140 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 FRG2BQ96QU4 278 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 SLC12A9Q9BXP2 914 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 ZDHHC3Q9NYG2 299 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 ANKMY1Q9P2S6 941 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 SLCO3A1Q9UIG8 710 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 SLC22A14Q9Y267 594 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 PCDHGA6Q9Y5G7 932 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 AGAP14A8MT82 685 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 CLK1P49759 484 aaKnown RBP17.44■□□□□ 0.38
SCARB1-203ENST00000415380 ACLYP53396 1101 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 ABRQ12979 859 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 CBARPQ8N350 705 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-203ENST00000415380 KIAA1522Q9P206 1035 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-203ENST00000415380 ZNF229Q9UJW7 825 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCARB1-203ENST00000415380 VPS4AQ9UN37 437 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 RNF6Q9Y252 685 aa17.44■□□□□ 0.38
SCARB1-203ENST00000415380 NPIPB15A6NHN6 443 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-203ENST00000415380 ACPPP15309 386 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 ITPKAP23677 461 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 SMAD3P84022 425 aaKnown RBP17.43■□□□□ 0.38
SCARB1-203ENST00000415380 SRSF11Q05519 484 aaKnown RBP17.43■□□□□ 0.38
SCARB1-203ENST00000415380 HSPA14Q0VDF9 509 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 SLC8B1Q6J4K2 584 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 Q6ZPB1 254 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-203ENST00000415380 ARMC8Q8IUR7 673 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 TCAIMQ8N3R3 496 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 KIAA1958Q8N8K9 716 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 HJURPQ8NCD3 748 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-203ENST00000415380 UPF1Q92900 1129 aaKnown RBP eCLIP17.43■□□□□ 0.383e-8■■■■■ 40.7
SCARB1-203ENST00000415380 COPS4Q9BT78 406 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 ANKHQ9HCJ1 492 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 NMRK2Q9NPI5 230 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 ABCB10Q9NRK6 738 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 YY2O15391 372 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 MYO1DO94832 1006 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 VIPP01282 170 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 HIST1H2AGP0C0S8 130 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-203ENST00000415380 COX7A2P14406 83 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 HIST1H2ADP20671 130 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 GSSP48637 474 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 SLC13A2Q13183 592 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 GPR153Q6NV75 609 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 HIST1H2AHQ96KK5 128 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 HRASLS5Q96KN8 279 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 C7orf34Q96L11 122 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 FCRL1Q96LA6 429 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 HIST1H2AJQ99878 128 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 H2AFJQ9BTM1 129 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 PRDM8Q9NQV8 689 aa17.43■□□□□ 0.38
SCARB1-203ENST00000415380 MBD1Q9UIS9 605 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-203ENST00000415380 M0R082 166 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 AIREO43918 545 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 UPK1BO75841 260 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 NUDT7P0C024 238 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
SCARB1-203ENST00000415380 PRKCZQ05513 592 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 ZNF404Q494X3 552 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 ATP13A5Q4VNC0 1218 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 TMEM53Q6P2H8 277 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 CRTC1Q6UUV9 634 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 LACC1Q8IV20 430 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 LYSMD2Q8IV50 215 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 VRK3Q8IV63 474 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 SYNPOQ8N3V7 929 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 CPA6Q8N4T0 437 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 KCNC2Q96PR1 638 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 COPS8Q99627 209 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 GABARAPL3Q9BY60 117 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 ELAC1Q9H777 363 aaKnown RBP17.42■□□□□ 0.38
SCARB1-203ENST00000415380 SOCS5O75159 536 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 C21orf33P30042 268 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-203ENST00000415380 UGT2B10P36537 528 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 CRYBA2P53672 197 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 ZXDBP98169 803 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 RETSATQ6NUM9 610 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 P3H2Q8IVL5 708 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 CDC26Q8NHZ8 85 aa17.42■□□□□ 0.38
SCARB1-203ENST00000415380 ASB11Q8WXH4 323 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms