RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 NUDT17P0C025 328 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 NCF1P14598 390 aaPredicted RBP14.02□□□□□ -0.17
LIMS1-206ENST00000414829 NPPBP16860 134 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 ZNF28P17035 718 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 CXCR2P25025 360 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 HPDP32754 393 aaPredicted RBP14.02□□□□□ -0.17
LIMS1-206ENST00000414829 PIK3CGP48736 1102 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 RPS15P62841 145 aaKnown RBP14.02□□□□□ -0.17
LIMS1-206ENST00000414829 IFFO1Q0D2I5 559 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 OR4D1Q15615 310 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 NDUFA9Q16795 377 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 ERCC6LQ2NKX8 1250 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 MUM1Q2TAK8 710 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 THOC6Q86W42 341 aaKnown RBP14.02□□□□□ -0.17
LIMS1-206ENST00000414829 CSNK1A1LQ8N752 337 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 TTLQ8NG68 377 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 UBTD2Q8WUN7 234 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 PYCR2Q96C36 320 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 NXNL1Q96CM4 212 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 MVB12AQ96EY5 273 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 SEC16BQ96JE7 1060 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 AIF1LQ9BQI0 150 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 EPB41L4BQ9H329 900 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 EHD1Q9H4M9 534 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 IKZF3Q9UKT9 509 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 RAB21Q9UL25 225 aa14.02□□□□□ -0.17
LIMS1-206ENST00000414829 TNPO3Q9Y5L0 923 aaKnown RBP14.02□□□□□ -0.17
LIMS1-206ENST00000414829 AHCTF1Q8WYP5 2266 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 IGKV1-8A0A0C4DH67 115 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 ZNF891A8MT65 544 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 H3BMH7 237 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 H7BY64 318 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 ERLIN1O75477 346 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 NTRK1P04629 796 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 SLC35G6P0C7Q6 338 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 CDH1P12830 882 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 GFAPP14136 432 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 RORAP35398 523 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 HSD17B3P37058 310 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 SLC6A12P48065 614 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 VSX2P58304 361 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 SKP1P63208 163 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 VAC14Q08AM6 782 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 CDC16Q13042 620 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 TGIF1Q15583 401 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 PDK4Q16654 411 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 CRTC2Q53ET0 693 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 NIPAL1Q6NVV3 410 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 PRMT9Q6P2P2 845 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 ZNF517Q6ZMY9 492 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 TMPRSS11BQ86T26 416 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 DSELQ8IZU8 1212 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 MREGQ8N565 214 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 CAMKVQ8NCB2 501 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 SNRNP27Q8WVK2 155 aaKnown RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 EXT2Q93063 718 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 MR1Q95460 341 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 SLC45A3Q96JT2 553 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 PRAP1Q96NZ9 151 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 ATOH8Q96SQ7 321 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 MRPL57Q9BQC6 102 aaKnown RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 SARGQ9BW04 601 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 PARD6BQ9BYG5 372 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 UNKQ9C0B0 810 aaKnown RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 PCMTD2Q9NV79 361 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 DNAJC11Q9NVH1 559 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 CUEDC1Q9NWM3 386 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 PTBP2Q9UKA9 531 aaKnown RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 CROTQ9UKG9 612 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 CDC14AQ9UNH5 594 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 SLC22A14Q9Y267 594 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 PCDHGA6Q9Y5G7 932 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 V9GYY5 206 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-206ENST00000414829 AKAP13Q12802 2813 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 WDFY3Q8IZQ1 3526 aa14.01□□□□□ -0.17
LIMS1-206ENST00000414829 TRBC2A0A5B9 178 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 K7ENP7 123 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 HAT1O14929 419 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 CLGNO14967 610 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 DSCR3O14972 297 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 SMIM24O75264 130 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 H2AFYO75367 372 aaKnown RBP14□□□□□ -0.17
LIMS1-206ENST00000414829 KATNA1O75449 491 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 RECKO95980 971 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 GSTA1P08263 222 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 RAB40ALP0C0E4 278 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 KRT15P19012 456 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 DLSTP36957 453 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 ALDH18A1P54886 795 aaKnown RBP14□□□□□ -0.17
LIMS1-206ENST00000414829 CSNK1G2P78368 415 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 DCDP81605 110 aaKnown RBP14□□□□□ -0.17
LIMS1-206ENST00000414829 IRF9Q00978 393 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 DLG1Q12959 904 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 PAGE2BQ5JRK9 111 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 WASHC2DQ5SRD0 308 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 INO80CQ6PI98 192 aaPredicted RBP14□□□□□ -0.17
LIMS1-206ENST00000414829 TIPARPQ7Z3E1 657 aaKnown RBP14□□□□□ -0.17
LIMS1-206ENST00000414829 SPNS2Q8IVW8 549 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 KRT78Q8N1N4 520 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms