RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 PTPRDP23468 1912 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 WDR27A2RRH5 827 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 NPIPB15A6NHN6 443 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SYN3O14994 580 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 CFLARO15519 480 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 ONECUT2O95948 504 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 RETP07949 1114 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 CPN2P22792 545 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 OR1D2P34982 312 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SERPINB5P36952 375 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PCYT1AP49585 367 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 DUSP4Q13115 394 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 CHRNA6Q15825 494 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SFRP5Q5T4F7 317 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 VWA5B1Q5TIE3 1220 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 IL23RQ5VWK5 629 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 KIAA1841Q6NSI8 718 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 CMASQ8NFW8 434 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 TFAP2CQ92754 450 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 RFKQ969G6 155 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 RTP4Q96DX8 246 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SEPT5Q99719 369 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PSD2Q9BQI7 771 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 C17orf80Q9BSJ5 609 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 BTBD2Q9BX70 525 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 YTHDF1Q9BYJ9 559 aaKnown RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 LRRC4Q9HBW1 653 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 C8orf4Q9NR00 106 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 NCKIPSDQ9NZQ3 722 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 OR5K4A6NMS3 321 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SLCO1B7G3V0H7 640 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 H7C0C1 242 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 AQP9O43315 295 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 LRCH4O75427 683 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF821O75541 412 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 CBR3O75828 277 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SEC24DO94855 1032 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 EFEMP2O95967 443 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 TGFAP01135 160 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 ERVK-10P10266 1014 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PRPS2P11908 318 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 ENO3P13929 434 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 POU2F1P14859 743 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PSMD8P48556 350 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SLC6A3Q01959 620 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PSMD5Q16401 504 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PRICKLE4Q2TBC4 344 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SPATA46Q5T0L3 261 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PRAMEF20Q5VT98 475 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 SYPL2Q5VXT5 272 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 ANKRD26P1Q6NSI1 321 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 INO80CQ6PI98 192 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 ZBTB49Q6ZSB9 765 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 CISD2Q8N5K1 135 aaKnown RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 ANKFN1Q8N957 763 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 FAM47BQ8NA70 645 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 TPD52L3Q96J77 140 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 KLHL32Q96NJ5 620 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PEBP4Q96S96 227 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 C9orf16Q9BUW7 83 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 MLPHQ9BV36 600 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 NPLQ9BXD5 320 aaPredicted RBP9.12□□□□□ -0.95
SNHG3-201ENST00000413987 GBA3Q9H227 469 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 PMF1-BGLAPU3KQ54 211 aa9.12□□□□□ -0.95
SNHG3-201ENST00000413987 MTMR11A4FU01 709 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 C2CD4BA6NLJ0 364 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CCNDBP1O95273 360 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 FHP07954 510 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 MYF6P23409 242 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PBX2P40425 430 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CCR10P46092 362 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 GSSP48637 474 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 TMBIM6P55061 237 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PKNOX1P55347 436 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 SHHQ15465 462 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PCGF3Q3KNV8 242 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 SGO1Q5FBB7 561 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CT83Q5H943 113 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 RAB41Q5JT25 222 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PSRC1Q6PGN9 363 aaPredicted RBP9.11□□□□□ -0.95
SNHG3-201ENST00000413987 BHLHA9Q7RTU4 235 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 FAM124AQ86V42 546 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 BBS1Q8NFJ9 593 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PNPT1Q8TCS8 783 aaKnown RBP9.11□□□□□ -0.95
SNHG3-201ENST00000413987 RCN3Q96D15 328 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 SLC35A4Q96G79 324 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 NSMCE3Q96MG7 304 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CLSTN3Q9BQT9 956 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 TPK1Q9H3S4 243 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 ARMC7Q9H6L4 198 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PLAC1Q9HBJ0 212 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 SERHLQ9NQF3 203 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 RIC8BQ9NVN3 520 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 GPATCH2LQ9NWQ4 482 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PLA2G3Q9NZ20 509 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 LPAR3Q9UBY5 353 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 MID2Q9UJV3 735 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PACSIN3Q9UKS6 424 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CDC14AQ9UNH5 594 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PLXNA4Q9HCM2 1894 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms