RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ABHD11Q8NFV4 315 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 ZNF501Q96CX3 271 aaPredicted RBP29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 NSUN5Q96P11 429 aaKnown RBP29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 TMEM237Q96Q45 408 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 SH3GL2Q99962 352 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 CHRNA10Q9GZZ6 450 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 PILRAQ9UKJ1 303 aa29.33■■■□□ 2.29
CSNK1E-206ENST00000413574 CEP295Q9C0D2 2601 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 FEZF1A0PJY2 475 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 CPA3P15088 417 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 CCR8P51685 355 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 ACY1Q03154 408 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 MPP2Q14168 576 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 FRMPD2BQ6IN97 320 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 NXPE4Q6UWF7 544 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 ERMP1Q7Z2K6 904 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 GOLGA7Q7Z5G4 137 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 ZNF740Q8NDX6 193 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 NRSN2Q9GZP1 204 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 SSU72Q9NP77 194 aaKnown RBP29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 KCNK9Q9NPC2 374 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 FBXO8Q9NRD0 319 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 ANKMY1Q9P2S6 941 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 COPG2Q9UBF2 871 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 PCTPQ9UKL6 214 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 ANGPTL3Q9Y5C1 460 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 PCDHGA8Q9Y5G5 932 aa29.32■■■□□ 2.28
CSNK1E-206ENST00000413574 TMEM150CB9EJG8 249 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 POLR1CO15160 346 aaPredicted RBP29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 EPB42P16452 691 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 PRKAA2P54646 552 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 CYP4F3Q08477 520 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 GTF2H2Q13888 395 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 NAA25Q14CX7 972 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 TTMPQ5BVD1 217 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 AGBL2Q5U5Z8 902 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 GTF2H2CQ6P1K8 395 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 SLCO4C1Q6ZQN7 724 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 MCATQ8IVS2 390 aaKnown RBP29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 USP7Q93009 1102 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 GPRC5BQ9NZH0 403 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 HRH2P25021 359 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 HERVK_113P63132 956 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 PCLAFQ15004 111 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 RNF44Q7L0R7 432 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 OR4K1Q8NGD4 311 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 OR1L3Q8NH93 324 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 RDH11Q8TC12 318 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 ERVK-6Q9BXR3 956 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 B3GALT1Q9Y5Z6 326 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 AK5Q9Y6K8 562 aa29.31■■■□□ 2.28
CSNK1E-206ENST00000413574 LOC105369274A0A096LPK9 316 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 LOC102723532A0A0G2JNH3 316 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 CLGNO14967 610 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 LCMT2O60294 686 aaKnown RBP29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 RPS17P08708 135 aaKnown RBP29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 TSPAN8P19075 237 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 UNC50Q53HI1 259 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 ZNF678Q5SXM1 525 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 SLC22A9Q8IVM8 553 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 C10orf107Q8IVU9 208 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 OR4N4Q8N0Y3 316 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 N4BP2L2Q92802 583 aaPredicted RBP29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 SLC46A1Q96NT5 459 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 TAAR9Q96RI9 348 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 ZFYVE21Q9BQ24 234 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 MECRQ9BV79 373 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 ZBTB26Q9HCK0 441 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 ANGPTL2Q9UKU9 493 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 PLCL2Q9UPR0 1127 aa29.3■■■□□ 2.28
CSNK1E-206ENST00000413574 C9orf172C9J069 976 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 MSL3P1P0C860 447 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 C1GALT1C1LP0DN25 315 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 EZRP15311 586 aaKnown RBP29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 IMPDH1P20839 514 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 CDH13P55290 713 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 RTP5Q14D33 572 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 XKR6Q5GH73 641 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 ZC3H12BQ5HYM0 836 aaKnown RBP29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 PRAMEF17Q5VTA0 474 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 CAPS2Q9BXY5 557 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 SPRTNQ9H040 489 aaPredicted RBP29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 IPPKQ9H8X2 491 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 PELI2Q9HAT8 420 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 SEMA4BQ9NPR2 832 aaPredicted RBP29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 OXSMQ9NWU1 459 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 RARRES3Q9UL19 164 aa29.29■■■□□ 2.28
CSNK1E-206ENST00000413574 PRPF4O43172 522 aaKnown RBP eCLIP29.28■■■□□ 2.283e-16■■■□□ 15.7
CSNK1E-206ENST00000413574 BRINP1O60477 761 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 TIAF1O95411 115 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 ETV4P43268 484 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 SHC2P98077 582 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 DOC2AQ14183 400 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 IL11RAQ14626 422 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 ATG9BQ674R7 924 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 ZNF483Q8TF39 744 aaPredicted RBP29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 ATP6V1G3Q96LB4 118 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 C1QTNF3Q9BXJ4 246 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 NOL11Q9H8H0 719 aaKnown RBP29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 FANCEQ9HB96 536 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms