RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 FFAR2O15552 330 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 GPR39O43194 453 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 KIAA0513O60268 411 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 LRATO95237 230 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 ITGB1P05556 798 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 STSP08842 583 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 TTPAP49638 278 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 ZNF140P52738 457 aaPredicted RBP8.66□□□□□ -1.02
SIK3-202ENST00000413553 CHRNEQ04844 493 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 EFEMP1Q12805 493 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 CLLU1OSQ5K130 101 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 SDHAF4Q5VUM1 108 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 RFPL4BQ6ZWI9 263 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 LRRTM3Q86VH5 581 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 CALHM3Q86XJ0 350 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 MIB1Q86YT6 1006 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 SPATA2LQ8IUW3 424 aaPredicted RBP8.66□□□□□ -1.02
SIK3-202ENST00000413553 RGL4Q8IZJ4 473 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 TMCO6Q96DC7 493 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 ST6GAL2Q96JF0 529 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 B3GALT6Q96L58 329 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 TRNT1Q96Q11 434 aaKnown RBP8.66□□□□□ -1.02
SIK3-202ENST00000413553 SLC30A2Q9BRI3 323 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 BBS2Q9BXC9 721 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 BEX2Q9BXY8 128 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 NXF2Q9GZY0 626 aaKnown RBP8.66□□□□□ -1.02
SIK3-202ENST00000413553 RUBCNLQ9H714 662 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 RPRD1BQ9NQG5 326 aaKnown RBP8.66□□□□□ -1.02
SIK3-202ENST00000413553 FNIP2Q9P278 1114 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 VPS9D1Q9Y2B5 631 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 PCDHGA6Q9Y5G7 932 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 TET1Q8NFU7 2136 aa8.66□□□□□ -1.02
SIK3-202ENST00000413553 TRBV5-3A0A0A0MS03 114 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 A0A0U1RQS6 177 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 SLC12A8A0AV02 714 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 H3BQ06 376 aaPredicted RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 SLC28A1O00337 649 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 PTHP01270 115 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 ADORA3P0DMS8 318 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 HOXB6P17509 224 aaKnown RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 IL1RNP18510 177 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 PCBP2Q15366 365 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■■□□□ 14.5
SIK3-202ENST00000413553 MED22Q15528 200 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 TAB1Q15750 504 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 PDE12Q6L8Q7 609 aaKnown RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 CYP4Z2PQ8N1L4 340 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 SIMC1Q8NDZ2 872 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 LPCAT1Q8NF37 534 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 MDGA1Q8NFP4 955 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 OR10T2Q8NGX3 314 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 LINC01599Q8WXQ3 324 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 TRIM63Q969Q1 353 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 TADA1Q96BN2 335 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 HSH2DQ96JZ2 352 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 CITED4Q96RK1 184 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 KCNH6Q9H252 994 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 EXOSC4Q9NPD3 245 aaKnown RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 AASDHPPTQ9NRN7 309 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 RAD18Q9NS91 495 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 WWOXQ9NZC7 414 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 PSORS1C1Q9UIG5 152 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 TBC1D24Q9ULP9 559 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 CCL27Q9Y4X3 112 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 PATJQ8NI35 1801 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 PTPRDP23468 1912 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 GOLGA8CPA6NN73 597 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 RFXANKO14593 260 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 WNT9AO14904 365 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 CAPN5O15484 640 aaPredicted RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 CDK1P06493 297 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 COL6A1P12109 1028 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 BCKDHAP12694 445 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 LBX1P52954 281 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 CRISP3P54108 245 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 RPS14P62263 151 aaKnown RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 CSNK2BP67870 215 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 GALK2Q01415 458 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 SLAMF1Q13291 335 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 SERINC3Q13530 473 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 FAM214AQ32MH5 1076 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 FBXL22Q6P050 247 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 FBXO46Q6PJ61 603 aaPredicted RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 ADAMTSL2Q86TH1 951 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 CADM2Q8N3J6 435 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 UTP15Q8TED0 518 aaKnown RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 GGHQ92820 318 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 PAWRQ96IZ0 340 aaKnown RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 C1orf74Q96LT6 269 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 SDHCQ99643 169 aaPredicted RBP8.65□□□□□ -1.02
SIK3-202ENST00000413553 PITX2Q99697 317 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 ACBD6Q9BR61 282 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 TAS2R16Q9NYV7 291 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 GPRC5BQ9NZH0 403 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 SPASTQ9UBP0 616 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 RPS6KA6Q9UK32 745 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 KLHL20Q9Y2M5 609 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 GRIP1Q9Y3R0 1128 aa8.65□□□□□ -1.02
SIK3-202ENST00000413553 TDRD15B5MCY1 1934 aaKnown RBP8.65□□□□□ -1.03
SIK3-202ENST00000413553 CLCA1A8K7I4 914 aa8.65□□□□□ -1.03
SIK3-202ENST00000413553 SNX4O95219 450 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms