RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 IFT20Q8IY31 132 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 ZNF843Q8N446 348 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 ENDOVQ8N8Q3 282 aaKnown RBP6.11□□□□□ -1.43
USP54-202ENST00000413442 EXD3Q8N9H8 876 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 CLEC1AQ8NC01 280 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 RHEBL1Q8TAI7 183 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 C9orf43Q8TAL5 461 aaPredicted RBP6.11□□□□□ -1.43
USP54-202ENST00000413442 FBXO25Q8TCJ0 367 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 EXTL1Q92935 676 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 TM4SF19Q96DZ7 209 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 LINGO1Q96FE5 620 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 CFAP36Q96G28 342 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 PPM1MQ96MI6 270 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 GPR22Q99680 433 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 RBBP8Q99708 897 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 AIF1LQ9BQI0 150 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 LRRC1Q9BTT6 524 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 ING2Q9H160 280 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 EHD1Q9H4M9 534 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 PPCSQ9HAB8 311 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 PELI2Q9HAT8 420 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 NMRAL1Q9HBL8 299 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 LRRC4CQ9HCJ2 640 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 GPAMQ9HCL2 828 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 IRAK4Q9NWZ3 460 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 CTNNAL1Q9UBT7 734 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 ADGRE2Q9UHX3 823 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 ACOT9Q9Y305 439 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 MAP4K5Q9Y4K4 846 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 OARD1Q9Y530 152 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 IKBKGQ9Y6K9 419 aa6.11□□□□□ -1.43
USP54-202ENST00000413442 SNRNP200O75643 2136 aaKnown RBP6.11□□□□□ -1.43
USP54-202ENST00000413442 A0A087X1B8 175 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 A0A088AWK7 358 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 A0A1W2PQ72 361 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CDC14CA4D256 554 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 H0YGG7 62 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 AGPSO00116 658 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 AGRPO00253 132 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 SUV39H1O43463 412 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 DPM1O60762 260 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CTSVO60911 334 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 NSA2O95478 260 aaKnown RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 WT1P19544 449 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 ZNF10P21506 573 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 SERPINB1P30740 379 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 SSTR1P30872 391 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CASP2P42575 452 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 BDKRB1P46663 353 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CDKN2DP55273 166 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 VSX2P58304 361 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 TAS2R39P59534 338 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 ARF3P61204 181 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 C2orf54Q08AI8 447 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 BIKQ13323 160 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 NAE1Q13564 534 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 DSG2Q14126 1118 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 FASTKQ14296 549 aaKnown RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 USP10Q14694 798 aaKnown RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 SLC9A5Q14940 896 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 ACAP2Q15057 778 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 ZKSCAN8Q15776 578 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 NKG7Q16617 165 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 HIST2H2ACQ16777 129 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 FAM83EQ2M2I3 478 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CCSMST1Q4G0I0 132 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 LACTB2Q53H82 288 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 C10orf62Q5T681 223 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 IRAK1BP1Q5VVH5 260 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 HIST2H2AA3Q6FI13 130 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 SULT1C3Q6IMI6 304 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 JMJD6Q6NYC1 403 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 KLC3Q6P597 504 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 FAM199XQ6PEV8 388 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 TRMT10BQ6PF06 316 aaKnown RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 SUSD1Q6UWL2 747 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 IGFL3Q6UXB1 125 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 RIPOR1Q6ZS17 1223 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 FRA10AC1Q70Z53 315 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 PIWIL4Q7Z3Z4 852 aaKnown RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 TBC1D1Q86TI0 1168 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 ANKMY2Q8IV38 441 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 UNC5BQ8IZJ1 945 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 KRT78Q8N1N4 520 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CSNK1A1LQ8N752 337 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 MFSD9Q8NBP5 474 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 SRFBP1Q8NEF9 429 aaKnown RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 GIMAP7Q8NHV1 300 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 UBE2E3Q969T4 207 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 KIAA1191Q96A73 305 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 COL26A1Q96A83 441 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 MIEF2Q96C03 454 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 ABHD17AQ96GS6 310 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CRELD1Q96HD1 420 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CABS1Q96KC9 395 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 MAGEB10Q96LZ2 347 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 C16orf45Q96MC5 204 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 IL17FQ96PD4 163 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 BBC3Q96PG8 261 aaPredicted RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 OR1F2PQ96R84 312 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms