RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 WDFY3Q8IZQ1 3526 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 ASPMQ8IZT6 3477 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 FRYQ5TBA9 3013 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 MAP1BP46821 2468 aaKnown RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 A0A1B0GX78 115 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 CCDC151A5D8V7 595 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 KRT87PA6NCN2 255 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 STX16-NPEPL1H3BU86 382 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 STX16O14662 325 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 PRPF4O43172 522 aaKnown RBP eCLIP7.87□□□□□ -1.15
RPE-204ENST00000411934 UGDHO60701 494 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 CTSVO60911 334 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 ERLIN1O75477 346 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 STK16O75716 305 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 RAB40ALP0C0E4 278 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 CCNYL3P0C7X3 344 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 PIM1P11309 404 aaPredicted RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 NPPBP16860 134 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 GNAZP19086 355 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 HPDP32754 393 aaPredicted RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 RORAP35398 523 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 HSD17B3P37058 310 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 CCR8P51685 355 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 ALDH18A1P54886 795 aaKnown RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 TMPRSS3P57727 454 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 SKP1P63208 163 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 NFKB2Q00653 900 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 MC1RQ01726 317 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 TLE3Q04726 772 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 DLG1Q12959 904 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 CDC16Q13042 620 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 NAA30Q147X3 362 aaPredicted RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 OR4D1Q15615 310 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 MUM1Q2TAK8 710 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 TECRLQ5HYJ1 363 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 ZNF385CQ66K41 422 aaPredicted RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 MBOAT1Q6ZNC8 495 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 THOC6Q86W42 341 aaKnown RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 MCATQ8IVS2 390 aaKnown RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 DSELQ8IZU8 1212 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 C2orf73Q8N5S3 287 aaPredicted RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 IL22RA1Q8N6P7 574 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 PPFIBP2Q8ND30 876 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 MZB1Q8WU39 189 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 KCTD4Q8WVF5 259 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 SLC5A11Q8WWX8 675 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 RERGQ96A58 199 aaPredicted RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 FKBP10Q96AY3 582 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 NXNL1Q96CM4 212 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 MRRFQ96E11 262 aaKnown RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 SLC45A3Q96JT2 553 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 GPR78Q96P69 363 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 OR2A5Q96R48 311 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 CTRCQ99895 268 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 MRPL57Q9BQC6 102 aaKnown RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 SELENOSQ9BQE4 189 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 TMEM79Q9BSE2 394 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 NDC1Q9BTX1 674 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 EFCAB11Q9BUY7 163 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 TMEM109Q9BVC6 243 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 ACAT2Q9BWD1 397 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 GPR87Q9BY21 358 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 ATG10Q9H0Y0 220 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 MRPL46Q9H2W6 279 aaKnown RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 ALG9Q9H6U8 611 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 LHX9Q9NQ69 397 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 DNAJC11Q9NVH1 559 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 MKS1Q9NXB0 559 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 CD274Q9NZQ7 290 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 PADI1Q9ULC6 663 aa7.87□□□□□ -1.15
RPE-204ENST00000411934 URB1O60287 2271 aaKnown RBP7.87□□□□□ -1.15
RPE-204ENST00000411934 ANKRD11Q6UB99 2663 aaPredicted RBP7.86□□□□□ -1.15
RPE-204ENST00000411934 TRBC2A0A5B9 178 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 C9J4A7 227 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 K7ENP7 123 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 TERTO14746 1132 aaKnown RBP7.86□□□□□ -1.15
RPE-204ENST00000411934 DSCR3O14972 297 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 KLK10O43240 276 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 ZNF749O43361 778 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 GLRA3O75311 464 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 KATNA1O75449 491 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 RFPL1O75677 317 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 WDR47O94967 919 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 TIAF1O95411 115 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 ALBP02768 609 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 CYC1P08574 325 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 MTHFD2P13995 350 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 AGXTP21549 392 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 SERPINB1P30740 379 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 AHRP35869 848 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 CASP2P42575 452 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 PGGT1BP53609 377 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 CSNK1G2P78368 415 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 REEP5Q00765 189 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 IRF9Q00978 393 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 LAPTM5Q13571 262 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 TSTA3Q13630 321 aaPredicted RBP7.86□□□□□ -1.15
RPE-204ENST00000411934 FAM53BQ14153 422 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 SETDB1Q15047 1291 aa7.86□□□□□ -1.15
RPE-204ENST00000411934 PCBP2Q15366 365 aaKnown RBP eCLIP7.86□□□□□ -1.152e-7■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms