RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RPTNQ6XPR3 784 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 KIAA1328Q86T90 577 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PAQR7Q86WK9 346 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 OTUD6BQ8N6M0 293 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 OR9A1PQ8NGU1 263 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SMPDL3AQ92484 453 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SYNPO2LQ9H987 977 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MKL2Q9ULH7 1088 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SCN2AQ99250 2005 aa13.52□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PKDREJQ9NTG1 2253 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 A0A0A6YYC8 382 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 A0A0U1RQJ8 604 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 A8MUI8 341 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 I3L1I5 382 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FOXS1O43638 330 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PHF2O75151 1096 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 WISP2O76076 250 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MATN4O95460 622 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FMO4P31512 558 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CASP6P55212 293 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CRADDP78560 199 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MAT1AQ00266 395 aaKnown RBP13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PMP22Q01453 160 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CTSL3PQ5NE16 218 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 GARNL3Q5VVW2 1013 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 XKRXQ6PP77 449 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TMEM205Q6UW68 189 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 NEK10Q6ZWH5 1172 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MPP5Q8N3R9 675 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 C1orf54Q8WWF1 131 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 RERGQ96A58 199 aaPredicted RBP13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FAM136AQ96C01 138 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 IMMP1LQ96LU5 166 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 BIRC8Q96P09 236 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 OR2A5Q96R48 311 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TUBB6Q9BUF5 446 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TREX1Q9NSU2 369 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TEKT2Q9UIF3 430 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ITGB1BP2Q9UKP3 347 aa13.51□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FBN2P35556 2912 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PCNX1Q96RV3 2341 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 IGKV1-8A0A0C4DH67 115 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SLC19A2O60779 497 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 NIPSNAP2O75323 286 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 C8orf89P0DMQ9 161 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ERGP11308 486 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ESRRAP11474 423 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PKMP14618 531 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 NMBRP28336 390 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 EFNA3P52797 238 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SNX1Q13596 522 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZNF766Q5HY98 468 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ICE2Q659A1 982 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SDCCAG8Q86SQ7 713 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZC3H7AQ8IWR0 971 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CCDC89Q8N998 374 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 METTL21AQ8WXB1 218 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 HES6Q96HZ4 224 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FRMD8P1Q9BZ68 369 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 DRC3Q9H069 523 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 UTP6Q9NYH9 597 aaKnown RBP13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TAC3Q9UHF0 121 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PCYOX1Q9UHG3 505 aa13.5□□□□□ -0.25
HLA-DQB2-229ENST00000411527 IGHV3-20A0A0C4DH32 117 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ARHGEF33A8MVX0 844 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TXNDC9O14530 226 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SEC24DO94855 1032 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 VAPBO95292 243 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 EZRP15311 586 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CHRM3P20309 590 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ATP5DP30049 168 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ADORA2A-AS1P86434 159 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 KIF5AQ12840 1032 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 GBX1Q14549 363 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ARHGAP19Q14CB8 494 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 C3AR1Q16581 482 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZNF425Q6IV72 752 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ADCK2Q7Z695 626 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ARHGEF39Q8N4T4 335 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PPFIBP2Q8ND30 876 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PKP4Q99569 1192 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TRIM8Q9BZR9 551 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 IL22Q9GZX6 179 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ABCF3Q9NUQ8 709 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PAK5Q9P286 719 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 GALPQ9UBC7 116 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CRYL1Q9Y2S2 319 aa13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ANKRD17O75179 2603 aaKnown RBP13.49□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CSMD2Q7Z408 3487 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 GOLGA8KD6RF30 607 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FAM227AF5H4B4 570 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 GOLGA8TH3BQL2 631 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MYO1CO00159 1063 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 P2RX6O15547 441 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PSIP1O75475 530 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CCNDBP1O95273 360 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CATP04040 527 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms