RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SPAG11AQ6PDA7 123 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 SPINT4Q6UDR6 99 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 TMEM207Q6UWW9 146 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF852Q6ZMS4 543 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 RINLQ6ZS11 566 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 CDHR3Q6ZTQ4 885 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 SH2D5Q6ZV89 423 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF365Q70YC5 407 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 GPR142Q7Z601 462 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF677Q86XU0 584 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 MFSD6LQ8IWD5 586 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 C14orf178Q8N769 122 aaPredicted RBP-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 CYB561D1Q8N8Q1 229 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 GATSQ8NAP1 163 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 MINDY2Q8NBR6 621 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 CCDC191Q8NCU4 936 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 CCNYQ8ND76 341 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ADPRHL1Q8NDY3 354 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 C19orf18Q8NEA5 215 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM71BQ8TC56 605 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 DCANP1Q8TF63 244 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 RNF133Q8WVZ7 376 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 RSAD2Q8WXG1 361 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ITFG2Q969R8 447 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 NABP1Q96AH0 204 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 GCC1Q96CN9 775 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 MTFMTQ96DP5 389 aaKnown RBP-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 MCRS1Q96EZ8 462 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 OTUB1Q96FW1 271 aaPredicted RBP-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 WDYHV1Q96HA8 205 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF333Q96JL9 665 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 CLUHP3Q96NS8 147 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 TSPAN32Q96QS1 320 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 FNBP1Q96RU3 617 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 RPS6KC1Q96S38 1066 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 BUD13Q9BRD0 619 aaKnown RBP eCLIP-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 UBAC1Q9BSL1 405 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 CHCHD5Q9BSY4 110 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 CELF4Q9BZC1 486 aaKnown RBP-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ATG10Q9H0Y0 220 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 DNTTIP1Q9H147 329 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 TMEM245Q9H330 911 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 MUC13Q9H3R2 512 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 DCTPP1Q9H773 170 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 CXorf36Q9H7Y0 433 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF430Q9H8G1 570 aaPredicted RBP-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF286AQ9HBT8 521 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 DMRT3Q9NQL9 472 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 ADPRHL2Q9NX46 363 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 VPS54Q9P1Q0 977 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 MMP17Q9ULZ9 603 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 KCNJ14Q9UNX9 436 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 MRPS16Q9Y3D3 137 aaKnown RBP-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 DOCK6Q96HP0 2047 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 PPRC1Q5VV67 1664 aaKnown RBP-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 GRIN2DO15399 1336 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 TTC21BQ7Z4L5 1316 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 SCN4AP35499 1836 aa-1.75□□□□□ -2.69
RNU4-88P-201ENST00000411220 PHRF1Q9P1Y6 1649 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 COL24A1Q17RW2 1714 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 PEAK1Q9H792 1746 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 A0A0G2JQZ4 141 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ABHD14A-ACY1A0A1B0GW23 586 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SH3PXD2BA1X283 911 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 POM121BA6NF01 834 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 NPIPB15A6NHN6 443 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 MPTX1A8MV57 137 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 PRSS46E5RG02 174 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 H3BRN7 92 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 M0R3H8 397 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 PSMD9O00233 223 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 MEIS2O14770 477 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 TAPBPO15533 448 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 TNFSF14O43557 240 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 CD5LO43866 347 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SMPD2O60906 423 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 IGSF3O75054 1194 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 IPO7O95373 1038 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 F9P00740 461 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 HSP90AB1P08238 724 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 PABPC1P11940 636 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 IMPDH1P20839 514 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 PAX7P23759 505 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 DUTP33316 252 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SOX6P35712 828 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 IGHMBP2P38935 993 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 GRIA1P42261 906 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 MATR3P43243 847 aaKnown RBP eCLIP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SPINT3P49223 89 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 KHKP50053 298 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ASCL1P50553 236 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 NEK3P51956 506 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 FXYD6P3P58550 94 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ELF3P78545 371 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 CDK3Q00526 305 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ORC2Q13416 577 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 MTM1Q13496 603 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ITGA7Q13683 1181 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 FASTKQ14296 549 aaKnown RBP-1.76□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms