RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 FAM49AQ9H0Q0 323 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SEMA6AQ9H2E6 1030 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FN3KQ9H479 309 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CNOT10Q9H9A5 744 aaKnown RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 APOBEC3GQ9HC16 384 aaKnown RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 XAB2Q9HCS7 855 aaKnown RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 OLAHQ9NV23 265 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 COQ3Q9NZJ6 369 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TBC1D7Q9P0N9 293 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 VPS18Q9P253 973 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TXNDC16Q9P2K2 825 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 LEF1Q9UJU2 399 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 AGTPBP1Q9UPW5 1226 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 B3GALT5Q9Y2C3 310 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SPIN1Q9Y657 262 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CDH23Q9H251 3354 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF646O15015 1829 aaPredicted RBP2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KDM3BQ7LBC6 1761 aa2.46□□□□□ -2.02
RNU6-1140P-201ENST00000410517 COL2A1P02458 1487 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MROH5Q6ZUA9 1318 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 A0A087WV48 116 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TRAV34A0A0B4J273 112 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 A0A0B4J293 547 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 A0A1B0GUL7 405 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 A0A1W2PPI3 338 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HYKKA2RU49 373 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM172BPA6NC97 362 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C19orf81C9J6K1 198 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM72CH0Y354 149 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CAPN9O14815 690 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SMAD6O43541 496 aaKnown RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 XRCC3O43542 346 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FGF17O60258 216 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PSMD10O75832 226 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KRT36O76013 467 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PGLSO95336 258 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SIX3O95343 332 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 IGHV4-39P01824 125 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 LIPFP07098 398 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DANCRP0C864 163 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MYOD1P15172 320 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GNAZP19086 355 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 EPORP19235 508 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CASTP20810 708 aaKnown RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ACHEP22303 614 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DGKAP23743 735 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CCR10P46092 362 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 COMPP49747 757 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CDH13P55290 713 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PSMC6P62333 389 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CX3CL1P78423 397 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KIF5AQ12840 1032 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PPIGQ13427 754 aaKnown RBP eCLIP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PTK6Q13882 451 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KEAP1Q14145 624 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NFATC4Q14934 902 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KIR2DS3Q14952 304 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ODF4Q2M2E3 257 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ODF3L2Q3SX64 289 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RAB6CQ53S08 254 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MDH1BQ5I0G3 518 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PAPPA-AS1Q5QFB9 102 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM72AQ5TYM5 149 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GFI1BQ5VTD9 330 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SHEQ5VZ18 495 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HIST2H2BCQ6DN03 193 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HIST2H2BDQ6DRA6 164 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 WBP2NLQ6ICG8 309 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM72DQ6L9T8 149 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FIGLAQ6QHK4 219 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM198BQ6UWH4 519 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM43BQ6ZT52 329 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KCTD8Q6ZWB6 473 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PLPPR4Q7Z2D5 763 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DNAJB7Q7Z6W7 309 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 AACSQ86V21 672 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FAM72BQ86X60 149 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NOA1Q8NC60 698 aaKnown RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ACVR1CQ8NER5 493 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GPRC5AQ8NFJ5 357 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 OR5R1Q8NH85 324 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 AFAP1L1Q8TED9 768 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NUDCD2Q8WVJ2 157 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SSMEM1Q8WWF3 244 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SYN2Q92777 582 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DAZLQ92904 295 aaKnown RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 STAMBPL1Q96FJ0 436 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF583Q96ND8 569 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF558Q96NG5 402 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GFI1Q99684 422 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 INPP5KQ9BT40 448 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CENPOQ9BU64 300 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 POLR3CQ9BUI4 534 aaPredicted RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GTPBP2Q9BX10 602 aaKnown RBP2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C1QTNF4Q9BXJ3 329 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RAB6CQ9H0N0 254 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 KCNN2Q9H2S1 579 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DPAGT1Q9H3H5 408 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RETREG1Q9H6L5 497 aa2.45□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CHST11Q9NPF2 352 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms