RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 SMURF1Q9HCE7 757 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 PDLIM7Q9NR12 457 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 VILLO15195 856 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 AP1G1O43747 822 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 TBX18O95935 607 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 FDXRP22570 491 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 RPS24P62847 133 aaKnown RBP12.57□□□□□ -0.4
DYSF-209ENST00000410041 SH3BP2P78314 561 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 NPRL3Q12980 569 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 SH3YL1Q96HL8 342 aaPredicted RBP12.57□□□□□ -0.4
DYSF-209ENST00000410041 IL12RB2Q99665 862 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 HAPLN2Q9GZV7 340 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 ZDHHC3Q9NYG2 299 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 CFAP97Q9P2B7 532 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 CACNG4Q9UBN1 327 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 PLOD2O00469 737 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 ATE1O95260 518 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 IL7P13232 177 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 RPS3P23396 243 aaKnown RBP eCLIP12.57□□□□□ -0.4
DYSF-209ENST00000410041 STOMP27105 288 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 KDELR2P33947 212 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 INHBCP55103 352 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 SLC36A3Q495N2 470 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 VARS2Q5ST30 1063 aaKnown RBP12.57□□□□□ -0.4
DYSF-209ENST00000410041 PNCKQ6P2M8 343 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 USP50Q70EL3 339 aaPredicted RBP12.57□□□□□ -0.4
DYSF-209ENST00000410041 CTU1Q7Z7A3 348 aaKnown RBP12.57□□□□□ -0.4
DYSF-209ENST00000410041 DEFB132Q7Z7B7 95 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 CARM1Q86X55 608 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 CD244Q9BZW8 370 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 CRTAC1Q9NQ79 661 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 TMEM248Q9NWD8 314 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 MS4A12Q9NXJ0 267 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 DPP7Q9UHL4 492 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 ENPP5Q9UJA9 477 aa12.57□□□□□ -0.4
DYSF-209ENST00000410041 OR14I1A6ND48 311 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 GSTT2BP0CG30 244 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 MATN1P21941 496 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 PTGES3Q15185 160 aaKnown RBP12.56□□□□□ -0.4
DYSF-209ENST00000410041 PRSS48Q7RTY5 328 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 LYSMD3Q7Z3D4 306 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 NATD1Q8N6N6 113 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 UPF1Q92900 1129 aaKnown RBP eCLIP12.56□□□□□ -0.4
DYSF-209ENST00000410041 ZNF558Q96NG5 402 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 MGLLQ99685 303 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ASAH2Q9NR71 780 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 OR10H1Q9Y4A9 318 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ROBO1Q9Y6N7 1651 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 EDIL3O43854 480 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
DYSF-209ENST00000410041 POP4O95707 220 aaKnown RBP12.56□□□□□ -0.4
DYSF-209ENST00000410041 CBSLP0DN79 551 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 CBSP35520 551 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 PTPRCAPQ14761 206 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 PON2Q15165 354 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 OLFML2AQ68BL7 652 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 SHQ1Q6PI26 577 aaKnown RBP12.56□□□□□ -0.4
DYSF-209ENST00000410041 RTL4Q6ZR62 310 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ZSWIM9Q86XI8 627 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 CARNS1A5YM72 827 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 LRRC14BA6NHZ5 514 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 NT5C1B-RDH14C9J2C7 533 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ENTPD6O75354 484 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 KHKP50053 298 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 SMSP52788 366 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ELMOD2Q8IZ81 293 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 PJA1Q8NG27 643 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 C1QTNF1Q9BXJ1 281 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 C1QTNF7Q9BXJ2 289 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 CPQQ9Y646 472 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 PRAMEF11O60813 436 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 SERPINA3P01011 423 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 GSTT2P0CG29 244 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 RAPSNQ13702 412 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 NDUFA9Q16795 377 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 PAMR1Q6UXH9 720 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ISCA2Q86U28 154 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 PHYKPLQ8IUZ5 450 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 KAT2AQ92830 837 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 S100A13Q99584 98 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 WACQ9BTA9 647 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 CD84Q9UIB8 345 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 SLC22A14Q9Y267 594 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ISM1B1AKI9 464 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 C1QTNF3-AMACRE9PGA6 284 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 WWP2O00308 870 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 TLX2O43763 284 aaPredicted RBP12.56□□□□□ -0.4
DYSF-209ENST00000410041 STBD1O95210 358 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 OXSR1O95747 527 aaPredicted RBP12.56□□□□□ -0.4
DYSF-209ENST00000410041 GNAO1P09471 354 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ZNF280AP59817 542 aaPredicted RBP12.56□□□□□ -0.4
DYSF-209ENST00000410041 PRR5P85299 388 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 FAM110CQ1W6H9 321 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 KIAA1161Q6NSJ0 714 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 DPY19L2P1Q6NXN4 242 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 ZNF613Q6PF04 617 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 TSPYL5Q86VY4 417 aaPredicted RBP12.56□□□□□ -0.4
DYSF-209ENST00000410041 RGL4Q8IZJ4 473 aa12.56□□□□□ -0.4
DYSF-209ENST00000410041 CYP2S1Q96SQ9 504 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms