RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 APOLD1Q96LR9 279 aa23.03■■□□□ 1.28
PMS1-205ENST00000409985 VPS35Q96QK1 796 aa23.03■■□□□ 1.28
PMS1-205ENST00000409985 BCL7BQ9BQE9 202 aa23.03■■□□□ 1.28
PMS1-205ENST00000409985 HEPHQ9BQS7 1158 aa23.03■■□□□ 1.28
PMS1-205ENST00000409985 TRIT1Q9H3H1 467 aaKnown RBP23.03■■□□□ 1.28
PMS1-205ENST00000409985 FAF1Q9UNN5 650 aaPredicted RBP23.03■■□□□ 1.28
PMS1-205ENST00000409985 COL6A3P12111 3177 aa23.03■■□□□ 1.28
PMS1-205ENST00000409985 PLXNA2O75051 1894 aa23.03■■□□□ 1.28
PMS1-205ENST00000409985 SEMG1P04279 462 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 ADH1AP07327 375 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 EPCAMP16422 314 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 PPIBP23284 216 aaKnown RBP23.02■■□□□ 1.28
PMS1-205ENST00000409985 CDKN2CP42773 168 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 IST1P53990 364 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 PNLIPRP1P54315 467 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 EPHA5P54756 1037 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 SEMG2Q02383 582 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 CD47Q08722 323 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 E2F2Q14209 437 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 VMACQ2NL98 169 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 ZNF829Q3KNS6 432 aaPredicted RBP23.02■■□□□ 1.28
PMS1-205ENST00000409985 LDLRAP1Q5SW96 308 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 GRHL2Q6ISB3 625 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 CAMKMTQ7Z624 323 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 SYT12Q8IV01 421 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 ELMO1Q92556 727 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 GLMNQ92990 594 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 LRIG1Q96JA1 1093 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 ADNPQ9H2P0 1102 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 GPRC5BQ9NZH0 403 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 MTCL1Q9Y4B5 1905 aaKnown RBP23.02■■□□□ 1.28
PMS1-205ENST00000409985 CLIC1O00299 241 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 HS6ST1O60243 411 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 EPN2O95208 641 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 ITIH1P19827 911 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 MAP4P27816 1152 aaKnown RBP23.02■■□□□ 1.28
PMS1-205ENST00000409985 ASMTP46597 345 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 CXCR4P61073 352 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 KEAP1Q14145 624 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 C10orf62Q5T681 223 aaPredicted RBP23.02■■□□□ 1.28
PMS1-205ENST00000409985 HENMT1Q5T8I9 393 aaKnown RBP23.02■■□□□ 1.28
PMS1-205ENST00000409985 OR4F3Q6IEY1 312 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 PDE12Q6L8Q7 609 aaKnown RBP23.02■■□□□ 1.28
PMS1-205ENST00000409985 TMEM25Q86YD3 366 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 CHST14Q8NCH0 376 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 FNDC8Q8TC99 324 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 SNX19Q92543 992 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 PALMDQ9NP74 551 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 SLCO3A1Q9UIG8 710 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 MBD1Q9UIS9 605 aaPredicted RBP23.02■■□□□ 1.28
PMS1-205ENST00000409985 UTS2RQ9UKP6 389 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 PSME2Q9UL46 239 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 CORO2BQ9UQ03 480 aa23.02■■□□□ 1.28
PMS1-205ENST00000409985 DOCK6Q96HP0 2047 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 TMEM265A0A087WTH1 108 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 FPGTO14772 594 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 NOBOXO60393 691 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 MRPS14O60783 128 aaKnown RBP23.01■■□□□ 1.27
PMS1-205ENST00000409985 MYO1DO94832 1006 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 PIGAP37287 484 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 WNT3P56703 355 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 NFATC3Q12968 1075 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 MOGQ16653 247 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 UGT8Q16880 541 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 OR2T5Q6IEZ7 315 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 Q7L0L9 218 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 PIWIL3Q7Z3Z3 882 aaKnown RBP23.01■■□□□ 1.27
PMS1-205ENST00000409985 TMEM179BQ7Z7N9 219 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 C10orf111Q8N326 155 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 KREMEN2Q8NCW0 462 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 PIK3C3Q8NEB9 887 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 OR2T29Q8NH02 315 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 IRF7Q92985 503 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 BORCS5Q969J3 196 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 PYCR2Q96C36 320 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 REXO4Q9GZR2 422 aaKnown RBP23.01■■□□□ 1.27
PMS1-205ENST00000409985 TBC1D14Q9P2M4 693 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 DKK3Q9UBP4 350 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 BTNL2Q9UIR0 455 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 HCFC2Q9Y5Z7 792 aa23.01■■□□□ 1.27
PMS1-205ENST00000409985 BNIP3LO60238 219 aa23■■□□□ 1.27
PMS1-205ENST00000409985 KCNK5O95279 499 aa23■■□□□ 1.27
PMS1-205ENST00000409985 GSNP06396 782 aa23■■□□□ 1.27
PMS1-205ENST00000409985 ABCB1P08183 1280 aaPredicted RBP23■■□□□ 1.27
PMS1-205ENST00000409985 MYCLP1P12525 358 aaPredicted RBP23■■□□□ 1.27
PMS1-205ENST00000409985 MATN1P21941 496 aa23■■□□□ 1.27
PMS1-205ENST00000409985 LAPTM5Q13571 262 aa23■■□□□ 1.27
PMS1-205ENST00000409985 Q6ZVU0 165 aa23■■□□□ 1.27
PMS1-205ENST00000409985 CHST15Q7LFX5 561 aaPredicted RBP23■■□□□ 1.27
PMS1-205ENST00000409985 ADIPOR2Q86V24 386 aa23■■□□□ 1.27
PMS1-205ENST00000409985 THOC6Q86W42 341 aaKnown RBP23■■□□□ 1.27
PMS1-205ENST00000409985 ZZZ3Q8IYH5 903 aa23■■□□□ 1.27
PMS1-205ENST00000409985 TBC1D15Q8TC07 691 aa23■■□□□ 1.27
PMS1-205ENST00000409985 MUL1Q969V5 352 aa23■■□□□ 1.27
PMS1-205ENST00000409985 PANX1Q96RD7 426 aa23■■□□□ 1.27
PMS1-205ENST00000409985 DCUN1D5Q9BTE7 237 aa23■■□□□ 1.27
PMS1-205ENST00000409985 SNX5Q9Y5X3 404 aa23■■□□□ 1.27
PMS1-205ENST00000409985 A0A1W2PPW3 197 aa23■■□□□ 1.27
PMS1-205ENST00000409985 MAGEB17A8MXT2 336 aa23■■□□□ 1.27
PMS1-205ENST00000409985 UPK3BL1B0FP48 263 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms