RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 RAB21Q9UL25 225 aa13.4□□□□□ -0.26
GYPC-203ENST00000409836 PADI1Q9ULC6 663 aa13.4□□□□□ -0.26
GYPC-203ENST00000409836 NBEAQ8NFP9 2946 aa13.4□□□□□ -0.26
GYPC-203ENST00000409836 LOC101059948A0A1B0GTJ6 334 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 TEX51A0A1B0GUA7 166 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 MEN1O00255 615 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 HAT1O14929 419 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 CAPN1P07384 714 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 TUBBP07437 444 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 CTSBP07858 339 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 RAB40ALP0C0E4 278 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 MTHFD2P13995 350 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 LIFP15018 202 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 TFEBP19484 476 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 WT1P19544 449 aaPredicted RBP13.39□□□□□ -0.27
GYPC-203ENST00000409836 TYK2P29597 1187 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 ARSFP54793 590 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 RPS15AP62244 130 aaKnown RBP13.39□□□□□ -0.27
GYPC-203ENST00000409836 CSNK1G2P78368 415 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 IRF9Q00978 393 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 VAC14Q08AM6 782 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 GRM7Q14831 915 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 ACAP2Q15057 778 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 TSNAXIP1Q2TAA8 658 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 TECRLQ5HYJ1 363 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 FRMPD2BQ6IN97 320 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 FBXO42Q6P3S6 717 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 RAPH1Q70E73 1250 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 MREGQ8N565 214 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 IL22RA1Q8N6P7 574 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 ACMSDQ8TDX5 336 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 KCTD4Q8WVF5 259 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 KIAA1143Q96AT1 154 aaPredicted RBP13.39□□□□□ -0.27
GYPC-203ENST00000409836 MVB12AQ96EY5 273 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 MED8Q96G25 268 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 CABS1Q96KC9 395 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 GPR87Q9BY21 358 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 ATG10Q9H0Y0 220 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 EHD1Q9H4M9 534 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 CNOT10Q9H9A5 744 aaKnown RBP13.39□□□□□ -0.27
GYPC-203ENST00000409836 PELI2Q9HAT8 420 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 GPRC5BQ9NZH0 403 aa13.39□□□□□ -0.27
GYPC-203ENST00000409836 A0A1B0GX78 115 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 SYCE1LA8MT33 242 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 TRIM49D1C9J1S8 452 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 TXNDC9O14530 226 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 TAPBPO15533 448 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 RFPL1O75677 317 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 GUCA1CO95843 209 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 ITGAXP20702 1163 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 GMPRP36959 345 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 KCNC1P48547 511 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 REEP5Q00765 189 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 SRSF6Q13247 344 aaKnown RBP13.38□□□□□ -0.27
GYPC-203ENST00000409836 NAA30Q147X3 362 aaPredicted RBP13.38□□□□□ -0.27
GYPC-203ENST00000409836 COL28A1Q2UY09 1125 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 THEMIS2Q5TEJ8 643 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 PRAMEF17Q5VTA0 474 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 GARNL3Q5VVW2 1013 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 KLC3Q6P597 504 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 LRRC70Q7Z2Q7 622 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 VN1R4Q7Z5H5 301 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 VASH2Q86V25 355 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 THOC6Q86W42 341 aaKnown RBP13.38□□□□□ -0.27
GYPC-203ENST00000409836 SPATA6LQ8N4H0 392 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 SLC5A11Q8WWX8 675 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 N4BP2L2Q92802 583 aaPredicted RBP13.38□□□□□ -0.27
GYPC-203ENST00000409836 NEIL2Q969S2 332 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 FKBP10Q96AY3 582 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 PYCR2Q96C36 320 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 NXNL1Q96CM4 212 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 WDR34Q96EX3 536 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 SEC16BQ96JE7 1060 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 C10orf90Q96M02 699 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 C17orf62Q9BQA9 187 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 PITHD1Q9GZP4 211 aaPredicted RBP13.38□□□□□ -0.27
GYPC-203ENST00000409836 SPRTNQ9H040 489 aaPredicted RBP13.38□□□□□ -0.27
GYPC-203ENST00000409836 SLC26A1Q9H2B4 701 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 ALG9Q9H6U8 611 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 GPN2Q9H9Y4 310 aaPredicted RBP13.38□□□□□ -0.27
GYPC-203ENST00000409836 KCND3Q9UK17 655 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 CROTQ9UKG9 612 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 TLK1Q9UKI8 766 aa13.38□□□□□ -0.27
GYPC-203ENST00000409836 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
GYPC-203ENST00000409836 LOC105369274A0A096LPK9 316 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 LOC102723532A0A0G2JNH3 316 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 POC1B-GALNT4F8VUJ3 575 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 H0YGG7 62 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 DSCR3O14972 297 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 NTRK1P04629 796 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 KLK3P07288 261 aaPredicted RBP13.37□□□□□ -0.27
GYPC-203ENST00000409836 CCNYL3P0C7X3 344 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 CDH1P12830 882 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 GSTM2P28161 218 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 DEKP35659 375 aaKnown RBP13.37□□□□□ -0.27
GYPC-203ENST00000409836 HSD17B3P37058 310 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 CCR8P51685 355 aa13.37□□□□□ -0.27
GYPC-203ENST00000409836 ARF3P61204 181 aaPredicted RBP13.37□□□□□ -0.27
GYPC-203ENST00000409836 DNASE1L3Q13609 305 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms