RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 MYH9P35579 1960 aaKnown RBP16.32■□□□□ 0.2
PCDHA13-202ENST00000409494 RSL1D1O76021 490 aaKnown RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 CCNB2O95067 398 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 S1PR4O95977 384 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 TGFB1P01137 390 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 CTSKP43235 329 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 HNRNPA1L2Q32P51 320 aaKnown RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 RASGRP3Q8IV61 690 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ZNF671Q8TAW3 534 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 GAL3ST4Q96RP7 486 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 GTPBP2Q9BX10 602 aaKnown RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 MCOLN1Q9GZU1 580 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 NUAK2Q9H093 628 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 Q9N2J8 555 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 SIX3O95343 332 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 SEC24AO95486 1093 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 C1GALT1C1LP0DN25 315 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 IGFBP5P24593 272 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ETV3P41162 512 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 STAT5AP42229 794 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 HTRA3P83110 453 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 DUOXA1Q1HG43 343 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 HSF5Q4G112 596 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 TOR1AIP1Q5JTV8 583 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 RSBN1Q5VWQ0 802 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 VN1R2Q8NFZ6 395 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 OR10A6Q8NH74 314 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 CYP8B1Q9UNU6 501 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 TMEM98Q9Y2Y6 226 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ITGB7P26010 798 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 BDKRB1P46663 353 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 SLC10A2Q12908 348 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 NUP54Q7Z3B4 507 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 IGDCC3Q8IVU1 814 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 FBXO15Q8NCQ5 510 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 TMIEQ8NEW7 156 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 AP3S1Q92572 193 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 SLC17A9Q9BYT1 436 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 PDP1Q9P0J1 537 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 PTGFRNQ9P2B2 879 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 LOC100506127A0A0U1RQW1 187 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 FAM149AA5PLN7 773 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 CAPN5O15484 640 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ARHGEF15O94989 841 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ADRB3P13945 408 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 MYL9P24844 172 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 MRPS21P82921 87 aaKnown RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ZNF630Q2M218 657 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ZNF678Q5SXM1 525 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 LCN1P1Q5VSP4 162 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ZZZ3Q8IYH5 903 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 CACTIN-AS1Q8N1I8 211 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 KIAA1143Q96AT1 154 aaPredicted RBP16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 ADAP2Q9NPF8 381 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 DNAJB9Q9UBS3 223 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 SATB2Q9UPW6 733 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 AKAP11Q9UKA4 1901 aa16.31■□□□□ 0.2
PCDHA13-202ENST00000409494 PRSS51A0A1B0GVH4 220 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 TTC34A8MYJ7 566 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 SEMA4FO95754 770 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 C6P13671 934 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 IVDP26440 423 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 CCR10P46092 362 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 RPS9P46781 194 aaKnown RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 DSTNP60981 165 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 LSM3P62310 102 aaKnown RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 ABHD18Q0P651 414 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 CNPY1Q3B7I2 92 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 MANEALQ5VSG8 457 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 TXNDC5Q8NBS9 432 aaKnown RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 VANGL1Q8TAA9 524 aaPredicted RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 S100ZQ8WXG8 99 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 NOL6Q9H6R4 1146 aaKnown RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 CIDEBQ9UHD4 219 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 TMEM35AQ53FP2 167 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 FBXO48Q5FWF7 155 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 TMEM198Q66K66 360 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 CGREF1Q99674 301 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 SYT11Q9BT88 431 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 DUX1O43812 170 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 AKAP8O43823 692 aaKnown RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 ECDO95905 644 aaPredicted RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 NUP62P37198 522 aaPredicted RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 FAM182AQ5T1J6 154 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 ZBTB46Q86UZ6 589 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 OR52B2Q96RD2 323 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 COQ10BQ9H8M1 238 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 CLIC1O00299 241 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 AQP1P29972 269 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 CLCN7P51798 805 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 MGAT3Q09327 533 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 PRRT3Q5FWE3 981 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 PERM1Q5SV97 790 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 MKKSQ9NPJ1 570 aaPredicted RBP16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 HRASLS2Q9NWW9 162 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
PCDHA13-202ENST00000409494 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.29■□□□□ 0.2
PCDHA13-202ENST00000409494 THRBP10828 461 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms