RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 PMS2P1A4D2B8 440 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 MATN2O00339 956 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 BIRC5O15392 142 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 HYAL3O43820 417 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 CTSVO60911 334 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 OR4F21O95013 312 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 THRAP10827 490 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 GNAZP19086 355 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 ERVPABLB-1P60509 514 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 CSNK1G2P78368 415 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 TRAF3Q13114 568 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 SLBPQ14493 270 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 TCHHL1Q5QJ38 904 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 LETMD1Q6P1Q0 360 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 NXPE4Q6UWF7 544 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 RBM44Q6ZP01 1051 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 SLCO4C1Q6ZQN7 724 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 SLITRK4Q8IW52 837 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 LSMEM2Q8N112 164 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 RNF175Q8N4F7 328 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 C19orf47Q8N9M1 422 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 OR4F6Q8NGB9 312 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 MACROD1Q9BQ69 325 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 C1QTNF3Q9BXJ4 246 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 RAB33BQ9H082 229 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 PCBD2Q9H0N5 130 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 MID1IP1Q9NPA3 183 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 C1GALT1Q9NS00 363 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 TMEM233B4DJY2 109 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 LCMT2O60294 686 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 SH3BGRLO75368 114 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 CCNDBP1O95273 360 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 MT-CO3P00414 261 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 EBLN1P0CF75 366 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 C1GALT1C1LP0DN25 315 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 HGFP14210 728 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 MLLT3P42568 568 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 FOXA1P55317 472 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 CYP4F2P78329 520 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 BST1Q10588 318 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 C16orf72Q14CZ0 275 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 RBBP5Q15291 538 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 CPSF6Q16630 551 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 ARL13AQ5H913 290 aaPredicted RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 DGLUCYQ7Z3D6 616 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 CDYL2Q8N8U2 506 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 MTFMTQ96DP5 389 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 HBEGFQ99075 208 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 PLCD4Q9BRC7 762 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 GEMIN8Q9NWZ8 242 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 DLL3Q9NYJ7 618 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 APOBEC2Q9Y235 224 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 TIMM22Q9Y584 194 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 PCDHGA1Q9Y5H4 931 aa13.54□□□□□ -0.24
CHRNA1-204ENST00000409323 SRRM3A6NNA2 597 aaPredicted RBP13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 SERPINE1P05121 402 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 FOLR1P15328 257 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 SERPINB3P29508 390 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 BCL6P41182 706 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 ARL4DP49703 201 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 CCR8P51685 355 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 INHBCP55103 352 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 E2F1Q01094 437 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 STX3Q13277 289 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 ILKQ13418 452 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 SQSTM1Q13501 440 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 RCN2Q14257 317 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 GPR19Q15760 415 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 SGO1Q5FBB7 561 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 FRMPD2BQ6IN97 320 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 ZNF425Q6IV72 752 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 FOXR1Q6PIV2 292 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 SCIMPQ6UWF3 145 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 MILR1Q7Z6M3 343 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 PAQR7Q86WK9 346 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 ZNF75CPQ92670 426 aaPredicted RBP13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 MANSC1Q9H8J5 431 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 STARD5Q9NSY2 213 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 OCIAD1Q9NX40 245 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 GPRC5BQ9NZH0 403 aa13.53□□□□□ -0.24
CHRNA1-204ENST00000409323 PTPRBP23467 1997 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 LOC105369274A0A096LPK9 316 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 LOC102723532A0A0G2JNH3 316 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 OR2A25A4D2G3 310 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 OR1F1O43749 312 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ZBTB11O95625 1053 aaPredicted RBP13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 HSPA4LO95757 839 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 SERPIND1P05546 499 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 PCNAP12004 261 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 MDH1P40925 334 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 SLC1A6P48664 564 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 NEK2P51955 445 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ABCE1P61221 599 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ABATP80404 500 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ZFP36L1Q07352 338 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ASPHQ12797 758 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms