RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 STSP08842 583 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 CHRM5P08912 532 aaPredicted RBP16.32■□□□□ 0.2
SYNC-202ENST00000409190 TGM1P22735 817 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 DNAJA1P31689 397 aaKnown RBP16.32■□□□□ 0.2
SYNC-202ENST00000409190 ALDH7A1P49419 539 aaKnown RBP16.32■□□□□ 0.2
SYNC-202ENST00000409190 IRF8Q02556 426 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 HKDC1Q2TB90 917 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.32■□□□□ 0.2
SYNC-202ENST00000409190 KIAA1614Q5VZ46 1190 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 OR4K1Q8NGD4 311 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 NELL1Q92832 810 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 SLC32A1Q9H598 525 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 TRBV5-3A0A0A0MS03 114 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 COQ9O75208 318 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 GJA1P17302 382 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 CRATP43155 626 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 TTLL9Q3SXZ7 439 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 TRIM46Q7Z4K8 759 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 SLC44A2Q8IWA5 706 aaPredicted RBP16.32■□□□□ 0.2
SYNC-202ENST00000409190 GTPBP3Q969Y2 492 aaKnown RBP16.32■□□□□ 0.2
SYNC-202ENST00000409190 YIPF6Q96EC8 236 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 COPS8Q99627 209 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 SLIRPQ9GZT3 109 aaKnown RBP16.32■□□□□ 0.2
SYNC-202ENST00000409190 DUSP21Q9H596 190 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 C14orf119Q9NWQ9 140 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 OGDHLQ9ULD0 1010 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 SCN10AQ9Y5Y9 1956 aa16.32■□□□□ 0.2
SYNC-202ENST00000409190 WBP4O75554 376 aaKnown RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 KCNK5O95279 499 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 GRK5P34947 590 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 CTSOP43234 321 aaPredicted RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 GZMMP51124 257 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 TIGD6Q17RP2 521 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 XKR6Q5GH73 641 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 ZNF362Q5T0B9 420 aaPredicted RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 LRRC66Q68CR7 880 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 ENTHD1Q8IYW4 607 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 NXPE1Q8N323 547 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 OR5AK3PQ8NH89 298 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 SCAMP4Q969E2 229 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 FEVQ99581 238 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 P2RY13Q9BPV8 354 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 KCNS3Q9BQ31 491 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 EXOSC4Q9NPD3 245 aaKnown RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 SNX6Q9UNH7 406 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 GNG14A0A1W2PPG7 69 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 GRXCR2A6NFK2 248 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 A8MV72 311 aaPredicted RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 EOMESO95936 686 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 TRBC1P01850 177 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 FPR1P21462 350 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 PTPN6P29350 595 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 PBLDP30039 288 aaPredicted RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 CDH12P55289 794 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 GANABQ14697 944 aaKnown RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 SPOUT1Q5T280 376 aaKnown RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 KDM4DQ6B0I6 523 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 TMCO2Q7Z6W1 182 aaPredicted RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 CALHM3Q86XJ0 350 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 PDLIM5Q96HC4 596 aaKnown RBP16.31■□□□□ 0.2
SYNC-202ENST00000409190 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.31■□□□□ 0.2
SYNC-202ENST00000409190 ACSL6Q9UKU0 697 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 FZD4Q9ULV1 537 aa16.31■□□□□ 0.2
SYNC-202ENST00000409190 SNPHO15079 494 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 SSX4O60224 188 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 ZDHHC11BP0C7U3 371 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 ACOX1Q15067 660 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 SF3B4Q15427 424 aaKnown RBP eCLIP16.3■□□□□ 0.2
SYNC-202ENST00000409190 UGT8Q16880 541 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 STEAP3Q658P3 488 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 SMG9Q9H0W8 520 aaKnown RBP16.3■□□□□ 0.2
SYNC-202ENST00000409190 TPT1P8Q9HAU6 139 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 TM9SF3Q9HD45 589 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 TRPS1Q9UHF7 1281 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 FAM32AQ9Y421 112 aaKnown RBP16.3■□□□□ 0.2
SYNC-202ENST00000409190 TET1Q8NFU7 2136 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 UNC80Q8N2C7 3258 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 H7C0S8 307 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 WNT9AO14904 365 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 SLC19A1P41440 591 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 RAB15P59190 212 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 KCNC4Q03721 635 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 SELENBP1Q13228 472 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 LSRQ86X29 649 aaPredicted RBP16.3■□□□□ 0.2
SYNC-202ENST00000409190 SVOPQ8N4V2 548 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 UPF1Q92900 1129 aaKnown RBP eCLIP16.3■□□□□ 0.2
SYNC-202ENST00000409190 USP7Q93009 1102 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 NTMT1Q9BV86 223 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 RNF6Q9Y252 685 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 J3KTA2 159 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 PABPC1P11940 636 aaKnown RBP16.3■□□□□ 0.2
SYNC-202ENST00000409190 SPAM1P38567 509 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 TRPC1P48995 793 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 IER5LQ5T953 404 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 FRG2Q64ET8 278 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 FAM217AQ8IXS0 508 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 ZZZ3Q8IYH5 903 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 FRG2BQ96QU4 278 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 ZDHHC6Q9H6R6 413 aa16.3■□□□□ 0.2
SYNC-202ENST00000409190 NECTIN3Q9NQS3 549 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms