RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 GIMAP5Q96F15 307 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF382Q96SR6 550 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 CD180Q99467 661 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PBDC1Q9BVG4 233 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 PIH1D1Q9NWS0 290 aaKnown RBP5.95□□□□□ -1.46
SCN1A-203ENST00000409050 TVP23BQ9NYZ1 205 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 GHRLQ9UBU3 117 aa5.95□□□□□ -1.46
SCN1A-203ENST00000409050 A0A096LPI6 279 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 C5orf51A6NDU8 294 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CCRL2O00421 344 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 EI24O14681 340 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 WNT9AO14904 365 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 NPC1O15118 1278 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 GMFGO60234 142 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PQBP1O60828 265 aaKnown RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 OAZ2O95190 189 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PSKH1P11801 424 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 VIPR1P32241 457 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CDK6Q00534 326 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PCDH1Q08174 1060 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 C4orf46Q504U0 113 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 KLHDC10Q6PID8 442 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 GALNT5Q7Z7M9 940 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 C1orf127Q8N9H9 656 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 SETD6Q8TBK2 473 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF431Q8TF32 576 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 TMEM234Q8WY98 164 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 TCEAL3Q969E4 200 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 BTF3L4Q96K17 158 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 LPIN3Q9BQK8 851 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF471Q9BX82 626 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PTPRHQ9HD43 1115 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 GDAP2Q9NXN4 497 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UBQLN2Q9UHD9 624 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PCDHB3Q9Y5E6 796 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PPLO60437 1756 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 M0R233 179 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 FLRT2O43155 660 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 OR1F1O43749 312 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PTTG1O95997 202 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 MSL3P1P0C860 447 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CXCR1P25024 350 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 SEPHS1P49903 392 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 DUSP4Q13115 394 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 ARFRP1Q13795 201 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CCINQ13939 588 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 RAB41Q5JT25 222 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PAOXQ6QHF9 649 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 RALGPS2Q86X27 583 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CARM1Q86X55 608 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 MRPL41Q8IXM3 137 aaKnown RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 OR8H3Q8N146 312 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 SIX5Q8N196 739 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CADM2Q8N3J6 435 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 SEC14L1Q92503 715 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 RAB7BQ96AH8 199 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 TMEM121BQ9BXQ6 578 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 SRMSQ9H3Y6 488 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 FBRSQ9HAH7 460 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 SNTG1Q9NSN8 517 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 TAS2R10Q9NYW0 307 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 DTLQ9NZJ0 730 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 COL20A1Q9P218 1284 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 RGS17Q9UGC6 210 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 A0A1B0GVI7 797 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 MEGF11A6BM72 1044 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CLCA1A8K7I4 914 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 TBX1O43435 398 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UGT1A9O60656 530 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 KDM4BO94953 1096 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 APBB3O95704 486 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CXCL14O95715 111 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF806P0C7X5 589 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 HOXB9P17482 250 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 TSPAN8P19075 237 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UGT1A6P19224 532 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 AGXTP21549 392 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UGT1A1P22309 533 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UGT1A4P22310 534 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UQCRC2P22695 453 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 E2F1Q01094 437 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 GHRHRQ02643 423 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 CRY2Q49AN0 593 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PIGGQ5H8A4 983 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PRAMEF14Q5SWL7 426 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 PRAMEF13Q5VWM6 474 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 RTL6Q6ICC9 239 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 ZDHHC24Q6UX98 284 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 WDR53Q7Z5U6 358 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 ZER1Q7Z7L7 766 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 TAC4Q86UU9 113 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF565Q8N9K5 539 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 SPERTQ8NA61 448 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 SPATA22Q8NHS9 363 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 OR5P2Q8WZ92 322 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 C1orf74Q96LT6 269 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 ZNF317Q96PQ6 595 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UGT1A7Q9HAW7 530 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UGT1A10Q9HAW8 530 aa5.94□□□□□ -1.46
SCN1A-203ENST00000409050 UGT1A8Q9HAW9 530 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms