RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SUFUQ9UMX1 484 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 NCKAP1Q9Y2A7 1128 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 BTBD3Q9Y2F9 522 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 TMED5Q9Y3A6 229 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 AK5Q9Y6K8 562 aa12.52□□□□□ -0.41
SMARCB1-203ENST00000407082 A0A1W2PP55 124 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 NPIPB15A6NHN6 443 aaPredicted RBP12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 C16orf96A6NNT2 1141 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 OR7A17O14581 309 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 LSM1O15116 133 aaKnown RBP12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 BCAT2O15382 392 aaPredicted RBP12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 FLRT2O43155 660 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 NUAK1O60285 661 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 GUCA1CO95843 209 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ATP1B2P14415 290 aaPredicted RBP12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 SLC2A4P14672 509 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ACPPP15309 386 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ITGB6P18564 788 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 UGT1A6P19224 532 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 UGT1A1P22309 533 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 UGT1A4P22310 534 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ITGB7P26010 798 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 UGT1A3P35503 534 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 UGT1A5P35504 534 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 DIO3P55073 304 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 UFM1P61960 85 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 TRAF3Q13114 568 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 CAMK2BQ13554 666 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 TLR1Q15399 786 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 C6orf10Q5SRN2 563 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 LDLRAP1Q5SW96 308 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 TMTC4Q5T4D3 741 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 PPP4R4Q6NUP7 873 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 LETMD1Q6P1Q0 360 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 FBXL19Q6PCT2 694 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 UGT2A3Q6UWM9 527 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 Q6ZSR9 355 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 USP30Q70CQ3 517 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 FAM124AQ86V42 546 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 FAM156AQ8NDB6 213 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 GPR26Q8NDV2 337 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 TRPV3Q8NET8 790 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 OR8J3Q8NGG0 315 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 LRTOMTQ8WZ04 291 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 SNX19Q92543 992 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ARRDC3Q96B67 414 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 CENPNQ96H22 339 aaPredicted RBP12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 BOCQ9BWV1 1114 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 SLC12A9Q9BXP2 914 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 DPY30Q9C005 99 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF696Q9H7X3 374 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 IL1RL2Q9HB29 575 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 SLC52A3Q9NQ40 469 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 CMTM6Q9NX76 183 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 USP36Q9P275 1121 aaKnown RBP12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 DKK3Q9UBP4 350 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 SERGEFQ9UGK8 458 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ANAPC2Q9UJX6 822 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF225Q9UK10 706 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 PCDHB3Q9Y5E6 796 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 ST14Q9Y5Y6 855 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 TENM4Q6N022 2769 aa12.51□□□□□ -0.41
SMARCB1-203ENST00000407082 KNL1Q8NG31 2342 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 A0A1B0GVT2 93 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 TSPAN11A1L157 253 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 TAPBPO15533 448 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 RRP8O43159 456 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 AHCYL1O43865 530 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 UGDHO60701 494 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 VARSP26640 1264 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 AOAHP28039 575 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 PRDX3P30048 256 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 OXTRP30559 389 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 DRD3P35462 400 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 RPL5P46777 297 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 CSNK1EP49674 416 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 TXNL4AP83876 142 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 PTSQ03393 145 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 LIPEQ05469 1076 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 CNTN1Q12860 1018 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 LIN52Q52LA3 116 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 CYP2R1Q6VVX0 501 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 MSANTD1Q6ZTZ1 278 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 UBE2R2Q712K3 238 aaPredicted RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 ERN2Q76MJ5 926 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 NRSN1Q8IZ57 195 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 LILRA2Q8N149 483 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 TRAM1L1Q8N609 369 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 PAPD5Q8NDF8 572 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 OR52B6Q8NGF0 335 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 PROKR1Q8TCW9 393 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 ASZ1Q8WWH4 475 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 STARD8Q92502 1023 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 METTL2AQ96IZ6 378 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 ZSCAN5AQ9BUG6 496 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 SPATA16Q9BXB7 569 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 HDAC8Q9BY41 377 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms