RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 NQO1P15559 274 aaKnown RBP20.26■□□□□ 0.83
TPM1-208ENST00000404484 ENGP17813 658 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 ID4P47928 161 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 AP5B1Q2VPB7 878 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 STPG1Q5TH74 334 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 MED27Q6P2C8 311 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 NXPE4Q6UWF7 544 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 SUSD1Q6UWL2 747 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 C17orf64Q86WR6 236 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 ARHGAP24Q8N264 748 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 POU5F2Q8N7G0 328 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 OR2L8Q8NGY9 312 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 CXorf40BQ96DE9 158 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 HBEGFQ99075 208 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 BRINP2Q9C0B6 783 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 SDR39U1Q9NRG7 319 aaPredicted RBP20.26■□□□□ 0.83
TPM1-208ENST00000404484 FARSBQ9NSD9 589 aaKnown RBP20.26■□□□□ 0.83
TPM1-208ENST00000404484 NOP53Q9NZM5 478 aaKnown RBP20.26■□□□□ 0.83
TPM1-208ENST00000404484 GIMAP2Q9UG22 337 aa20.26■□□□□ 0.83
TPM1-208ENST00000404484 CDV3Q9UKY7 258 aaKnown RBP20.26■□□□□ 0.83
TPM1-208ENST00000404484 PNMA8BQ9ULN7 279 aaPredicted RBP20.26■□□□□ 0.83
TPM1-208ENST00000404484 A6NCN8 305 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 NPIPB8E9PQR5 432 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 PRPH2P23942 346 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 CPA2P48052 419 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 LIMK1P53667 647 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 STX5Q13190 355 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 PDCD4Q53EL6 469 aaKnown RBP20.25■□□□□ 0.83
TPM1-208ENST00000404484 AGKQ53H12 422 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 RINLQ6ZS11 566 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 KIF2BQ8N4N8 673 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 OR52E1Q8NGJ3 308 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 ZFPM2Q8WW38 1151 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 PELI2Q9HAT8 420 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 BRF2Q9HAW0 419 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 LRTM1Q9HBL6 345 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 C1orf109Q9NX04 203 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 TAS2R1Q9NYW7 299 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 EIF3LQ9Y262 564 aaKnown RBP20.25■□□□□ 0.83
TPM1-208ENST00000404484 GPR45Q9Y5Y3 372 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 ASCC3Q8N3C0 2202 aaKnown RBP20.25■□□□□ 0.83
TPM1-208ENST00000404484 LOC100653049A0A140TA62 436 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 A0A1W2PR77 199 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 OR5K4A6NMS3 321 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 C4orf47A7E2U8 309 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 ARHGAP33O14559 1287 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 KRT34O76011 436 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 CD22P20273 847 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 GPX3P22352 226 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 CXCR2P25025 360 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 SHMT2P34897 504 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 CSNK1EP49674 416 aaKnown RBP20.25■□□□□ 0.83
TPM1-208ENST00000404484 ZFAND4Q86XD8 727 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 NRROSQ86YC3 692 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 FAM9CQ8IZT9 166 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 KRT78Q8N1N4 520 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 METTL2AQ96IZ6 378 aaKnown RBP20.25■□□□□ 0.83
TPM1-208ENST00000404484 SLC25A23Q9BV35 468 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 TBC1D10AQ9BXI6 508 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 TM9SF3Q9HD45 589 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 NDE1Q9NXR1 346 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 ASIC5Q9NY37 505 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 ZIM2Q9NZV7 527 aa20.25■□□□□ 0.83
TPM1-208ENST00000404484 SCHIP1Q9P0W5 487 aaPredicted RBP20.25■□□□□ 0.83
TPM1-208ENST00000404484 CABIN1Q9Y6J0 2220 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 SLC30A4O14863 429 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 SNRPB2P08579 225 aaKnown RBP20.24■□□□□ 0.83
TPM1-208ENST00000404484 SDHBP21912 280 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 MAPK1P28482 360 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 PHEXP78562 749 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 RBM15BQ8NDT2 890 aaKnown RBP20.24■□□□□ 0.83
TPM1-208ENST00000404484 CCL4L1Q8NHW4 92 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 WDR20Q8TBZ3 569 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 MCUR1Q96AQ8 359 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 MTFMTQ96DP5 389 aaKnown RBP20.24■□□□□ 0.83
TPM1-208ENST00000404484 CMTM7Q96FZ5 175 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 ACPTQ9BZG2 426 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 TAC3Q9UHF0 121 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 TMED5Q9Y3A6 229 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 PCDHB11Q9Y5F2 797 aa20.24■□□□□ 0.83
TPM1-208ENST00000404484 TLR4O00206 839 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 ACPPP15309 386 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 VARSP26640 1264 aaKnown RBP20.23■□□□□ 0.83
TPM1-208ENST00000404484 AFF3P51826 1226 aaKnown RBP20.23■□□□□ 0.83
TPM1-208ENST00000404484 DIO3P55073 304 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 RPL38P63173 70 aaKnown RBP20.23■□□□□ 0.83
TPM1-208ENST00000404484 KCNJ2P63252 427 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 HMGCS1Q01581 520 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 BNC1Q01954 994 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 CUL3Q13618 768 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 SLBPQ14493 270 aaKnown RBP eCLIP20.23■□□□□ 0.83
TPM1-208ENST00000404484 PUM1Q14671 1186 aaKnown RBP eCLIP20.23■□□□□ 0.835e-9■□□□□ 8.1
TPM1-208ENST00000404484 CACHD1Q5VU97 1274 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 TRIM48Q8IWZ4 208 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 OR7G3Q8NG95 312 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 OR2I1PQ8NGU4 316 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 TSPEARQ8WU66 669 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 GTPBP2Q9BX10 602 aaKnown RBP20.23■□□□□ 0.83
TPM1-208ENST00000404484 PITHD1Q9GZP4 211 aaPredicted RBP20.23■□□□□ 0.83
TPM1-208ENST00000404484 MMADHCQ9H3L0 296 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms