RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RELAQ04206 551 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 FOXM1Q08050 763 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 NXPE4Q6UWF7 544 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 RNF44Q7L0R7 432 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 TMPRSS11BQ86T26 416 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 TEX9Q8N6V9 391 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 CCDC126Q96EE4 140 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 ERVK-6Q9BXR3 956 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 PELI2Q9HAT8 420 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 PCTPQ9UKL6 214 aa28.14■■■□□ 2.1
USP42-202ENST00000404008 HAT1O14929 419 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 EPB42P16452 691 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 SHC2P98077 582 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 GTF2H2Q13888 395 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 DEFB110Q30KQ9 67 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 GTF2H2CQ6P1K8 395 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 FBXO42Q6P3S6 717 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 CYB5D1Q6P9G0 228 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 SLCO4C1Q6ZQN7 724 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 ZNF501Q96CX3 271 aaPredicted RBP28.13■■■□□ 2.09
USP42-202ENST00000404008 TMEM237Q96Q45 408 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 FANCEQ9HB96 536 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 APMAPQ9HDC9 416 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 SLC39A1Q9NY26 324 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 ANGPTL3Q9Y5C1 460 aa28.13■■■□□ 2.09
USP42-202ENST00000404008 CLGNO14967 610 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 IMPDH1P20839 514 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 PIK3CGP48736 1102 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 MAPK10P53779 464 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 RAB15P59190 212 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 IL11RAQ14626 422 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 RTP5Q14D33 572 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 PCLAFQ15004 111 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 ZC3H12BQ5HYM0 836 aaKnown RBP28.12■■■□□ 2.09
USP42-202ENST00000404008 ZNF678Q5SXM1 525 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 ATG9BQ674R7 924 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 GOLGA7Q7Z5G4 137 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 GOLGA6L1Q8N7Z2 621 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 L3HYPDHQ96EM0 354 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 ATP6V1G3Q96LB4 118 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 FCRL4Q96PJ5 515 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 ZFYVE21Q9BQ24 234 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 OXSMQ9NWU1 459 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 PLCL2Q9UPR0 1127 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 CEP295Q9C0D2 2601 aa28.12■■■□□ 2.09
USP42-202ENST00000404008 MED19A0JLT2 244 aaPredicted RBP28.11■■■□□ 2.09
USP42-202ENST00000404008 POLR1CO15160 346 aaPredicted RBP28.11■■■□□ 2.09
USP42-202ENST00000404008 TM9SF1O15321 606 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 PRAMEF4O60810 478 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 TNFSF15O95150 251 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 ETV4P43268 484 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 TTMPQ5BVD1 217 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 PRAMEF9Q5VWM5 478 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 IGF2-ASQ6U949 168 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 MCATQ8IVS2 390 aaKnown RBP28.11■■■□□ 2.09
USP42-202ENST00000404008 ZNF483Q8TF39 744 aaPredicted RBP28.11■■■□□ 2.09
USP42-202ENST00000404008 PMEPA1Q969W9 287 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 TAAR9Q96RI9 348 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 ACBD3Q9H3P7 528 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 EHD1Q9H4M9 534 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 KCNK9Q9NPC2 374 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 TRABD2BA6NFA1 517 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 TMEM150CB9EJG8 249 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 KATNA1O75449 491 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 C1GALT1C1LP0DN25 315 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 FGF5P12034 268 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 VARSP26640 1264 aaKnown RBP28.11■■■□□ 2.09
USP42-202ENST00000404008 MEF2AQ02078 507 aaPredicted RBP28.11■■■□□ 2.09
USP42-202ENST00000404008 PCDH1Q08174 1060 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 MPP2Q14168 576 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 PLD3Q8IV08 490 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 NXPE2Q96DL1 559 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 WDR34Q96EX3 536 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 SLC46A1Q96NT5 459 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 NSUN5Q96P11 429 aaKnown RBP28.11■■■□□ 2.09
USP42-202ENST00000404008 CTRCQ99895 268 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 DDA1Q9BW61 102 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 SPNS1Q9H2V7 528 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 SYNPO2LQ9H987 977 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 RARRES3Q9UL19 164 aa28.11■■■□□ 2.09
USP42-202ENST00000404008 A0A0J9YVX5 310 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 ZWINTO95229 277 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 GRK3P35626 688 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 DNAJB13P59910 316 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 REEP5Q00765 189 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 E2F2Q14209 437 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 UNC50Q53HI1 259 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 XKR6Q5GH73 641 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 DCAF12Q5T6F0 453 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 FRMPD2BQ6IN97 320 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 RPS27LQ71UM5 84 aaKnown RBP28.1■■■□□ 2.09
USP42-202ENST00000404008 BPHLQ86WA6 291 aaPredicted RBP28.1■■■□□ 2.09
USP42-202ENST00000404008 C10orf107Q8IVU9 208 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 OR8K5Q8NH50 307 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 OR1L3Q8NH93 324 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 N4BP2L2Q92802 583 aaPredicted RBP28.1■■■□□ 2.09
USP42-202ENST00000404008 USP7Q93009 1102 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 SARGQ9BW04 601 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 IPPKQ9H8X2 491 aa28.1■■■□□ 2.09
USP42-202ENST00000404008 ZBTB26Q9HCK0 441 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms