RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 GPR27Q9NS67 375 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 GID8Q9NWU2 228 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 PCOLCE2Q9UKZ9 415 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 ICKQ9UPZ9 632 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 L3MBTL1Q9Y468 752 aa24.7■■□□□ 1.54
CPNE1-205ENST00000401607 A0A1W2PPC4 97 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 MSX2P35548 267 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-205ENST00000401607 PXNP49023 591 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-205ENST00000401607 SLC7A2P52569 658 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 CLDN8P56748 225 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 NFYCQ13952 458 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 CAPRIN1Q14444 709 aaKnown RBP24.69■■□□□ 1.54
CPNE1-205ENST00000401607 HID1Q8IV36 788 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 GLB1L3Q8NCI6 653 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-205ENST00000401607 OR2L8Q8NGY9 312 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 STMN2Q93045 179 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 SH3KBP1Q96B97 665 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 CUEDC1Q9NWM3 386 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-205ENST00000401607 TRNAU1APQ9NX07 287 aaKnown RBP24.69■■□□□ 1.54
CPNE1-205ENST00000401607 SLCO1B1Q9Y6L6 691 aa24.69■■□□□ 1.54
CPNE1-205ENST00000401607 ACTR1BP42025 376 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 ACTR1AP61163 376 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 FOXM1Q08050 763 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 HIST2H2ACQ16777 129 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-205ENST00000401607 C10orf62Q5T681 223 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-205ENST00000401607 HIST2H2AA3Q6FI13 130 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 SLC30A9Q6PML9 568 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 NRROSQ86YC3 692 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 DPP10Q8N608 796 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 FAM156AQ8NDB6 213 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 METTL2AQ96IZ6 378 aaKnown RBP24.68■■□□□ 1.54
CPNE1-205ENST00000401607 TSSK3Q96PN8 268 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 RAB11FIP5Q9BXF6 653 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 EBPLQ9BY08 206 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 PELI2Q9HAT8 420 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 DMRT3Q9NQL9 472 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 SLAMF8Q9P0V8 285 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 ABCD2Q9UBJ2 740 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 CD300AQ9UGN4 299 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 HEBP2Q9Y5Z4 205 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 DGKBQ9Y6T7 804 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 PCM1Q15154 2024 aa24.68■■□□□ 1.54
CPNE1-205ENST00000401607 A6NCN8 305 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 PRORSD1PA6NEY8 169 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 C19orf67A6NJJ6 358 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 FOXE1O00358 373 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-205ENST00000401607 MAP3K7O43318 606 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 SH3BGRLO75368 114 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 NUDT1P36639 197 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 MS4A2Q01362 244 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 RCN1Q15293 331 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 FAM174BQ3ZCQ3 159 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 PRMT9Q6P2P2 845 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 LPCAT2Q7L5N7 544 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 ABHD11Q8NFV4 315 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 CHRDQ9H2X0 955 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 TSC22D4Q9Y3Q8 395 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 SLC6A2P23975 617 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 SF1Q15637 639 aaKnown RBP24.67■■□□□ 1.54
CPNE1-205ENST00000401607 SPANXN4Q5MJ08 99 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 VN1R5Q7Z5H4 357 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 CHTF18Q8WVB6 975 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 SNX19Q92543 992 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 EGLN2Q96KS0 407 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 KIR3DX1Q9H7L2 352 aa24.67■■□□□ 1.54
CPNE1-205ENST00000401607 ZNF624Q9P2J8 865 aaPredicted RBP24.67■■□□□ 1.54
CPNE1-205ENST00000401607 RUVBL1Q9Y265 456 aaKnown RBP24.67■■□□□ 1.54
CPNE1-205ENST00000401607 NME4O00746 187 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 RAE1P78406 368 aaKnown RBP24.66■■□□□ 1.54
CPNE1-205ENST00000401607 ACSM2AQ08AH3 577 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 EIF2B5Q13144 721 aaKnown RBP24.66■■□□□ 1.54
CPNE1-205ENST00000401607 SAMD4BQ5PRF9 694 aaKnown RBP24.66■■□□□ 1.54
CPNE1-205ENST00000401607 ACSM2BQ68CK6 577 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 TMIGD1Q6UXZ0 262 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 SLC15A3Q8IY34 581 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 FAM9CQ8IZT9 166 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 C1orf52Q8N6N3 182 aaKnown RBP24.66■■□□□ 1.54
CPNE1-205ENST00000401607 JADE3Q92613 823 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 UBE2E3Q969T4 207 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 CLDN23Q96B33 292 aa24.66■■□□□ 1.54
CPNE1-205ENST00000401607 SUCOQ9UBS9 1254 aaKnown RBP24.66■■□□□ 1.54
CPNE1-205ENST00000401607 THEGLP0DJG4 465 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 PCSK2P16519 638 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 TCN1P20061 433 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-205ENST00000401607 ICE2Q659A1 982 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 RIMKLAQ8IXN7 391 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 KRT78Q8N1N4 520 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 SPEM1Q8N4L4 309 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 PJA1Q8NG27 643 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 OR2A1Q8NGT9 310 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 SLC13A3Q8WWT9 602 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 SLC6A18Q96N87 628 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 TMEM74Q96NL1 305 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 TCEAL2Q9H3H9 227 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-205ENST00000401607 CMTM6Q9NX76 183 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 PPT2Q9UMR5 302 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 PCDHA9Q9Y5H5 950 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 COLEC10Q9Y6Z7 277 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 SPTY2D1-AS1A0A0U1RR47 76 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 ACOT8O14734 319 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms