RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ZSCAN9O15535 394 aaPredicted RBP12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 HOXA2O43364 376 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 HTR1AP08908 422 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 LHCGRP22888 699 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 HOXD10P28358 340 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 BCAP31P51572 246 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 ISL1P61371 349 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 PPP2R2BQ00005 443 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 MC1RQ01726 317 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 ABHD18Q0P651 414 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 Q6ZNX1 250 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 POC5Q8NA72 575 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 PAPD5Q8NDF8 572 aaKnown RBP12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 ISG20Q96AZ6 181 aaKnown RBP12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 GORASP2Q9H8Y8 452 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 TRIM39Q9HCM9 518 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 VPS29Q9UBQ0 182 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 DUSP12Q9UNI6 340 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 ITM2BQ9Y287 266 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 CFAP20Q9Y6A4 193 aaKnown RBP12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 DOCK6Q96HP0 2047 aa12.27□□□□□ -0.44
PPP4R1-202ENST00000400555 GP2P55259 537 aaKnown RBP12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 CREMQ03060 361 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 RELAQ04206 551 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 MED22Q15528 200 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 TPRG1Q6ZUI0 275 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 USP51Q70EK9 711 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 B3GNT8Q7Z7M8 397 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 HEATR4Q86WZ0 1026 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 CFAP206Q8IYR0 622 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 OTUB1Q96FW1 271 aaPredicted RBP12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 COPS4Q9BT78 406 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 MOSPD1Q9UJG1 213 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 FBXO10Q9UK96 956 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 BTBD3Q9Y2F9 522 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 SCN10AQ9Y5Y9 1956 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 TTC36A6NLP5 189 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 ACRP10323 421 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 MASP1P48740 699 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 DOC2AQ14183 400 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 VMACQ2NL98 169 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 DPY19L1Q2PZI1 675 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 ZNF284Q2VY69 593 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 CCSAPQ6IQ19 270 aaPredicted RBP12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 RAVER1Q8IY67 606 aaKnown RBP12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 ING5Q8WYH8 240 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 ZNF558Q96NG5 402 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 YME1L1Q96TA2 773 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 YTHDF1Q9BYJ9 559 aaKnown RBP12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 LINC00597Q9H2U6 94 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 HCFC1R1Q9NWW0 138 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 ADPRHL2Q9NX46 363 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 INSL5Q9Y5Q6 135 aa12.27□□□□□ -0.45
PPP4R1-202ENST00000400555 TNFRSF11BO00300 401 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 PLK4O00444 970 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 TSPAN6O43657 245 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 SEC14L2O76054 403 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 C7P10643 843 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 PRPS2P11908 318 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 ETFAP13804 333 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 ATP1B2P14415 290 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 NNMTP40261 264 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 RPS26P62854 115 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 SMARCB1Q12824 385 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 IRF5Q13568 498 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 ZNF846Q147U1 533 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 CPZQ66K79 652 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 THOC6Q86W42 341 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 NAGSQ8N159 534 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 IL4I1Q96RQ9 567 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 C1QTNF3Q9BXJ4 246 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 ZNF556Q9HAH1 456 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 SRRDQ9UH36 339 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 INTS6Q9UL03 887 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 PLAGL1Q9UM63 463 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 CCL26Q9Y258 94 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 TSC22D4Q9Y3Q8 395 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 C5orf42Q9H799 3197 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 DOCK4Q8N1I0 1966 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 SMIM30A4D0T7 59 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 M0QX08 132 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 GAPDHSO14556 408 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 DNTTP04053 509 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 SRCP12931 536 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 GTF2E2P29084 291 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 PTGER1P34995 402 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 RPS13P62277 151 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 CLCA4Q14CN2 919 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 ADPRMQ3LIE5 342 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 GPR149Q86SP6 731 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 SH3YL1Q96HL8 342 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 CEP19Q96LK0 163 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 FOPNLQ96NB1 174 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 CPPED1Q9BRF8 314 aaPredicted RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 TSEN34Q9BSV6 310 aaKnown RBP12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 RNF167Q9H6Y7 350 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 TAS2R16Q9NYV7 291 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 RPS6KA6Q9UK32 745 aa12.26□□□□□ -0.45
PPP4R1-202ENST00000400555 EFCAB9A8MZ26 197 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms