RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 CRNNQ9UBG3 495 aaPredicted RBP17.98■□□□□ 0.47
USP48-204ENST00000400301 CD300AQ9UGN4 299 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 COL11A1P12107 1806 aaPredicted RBP17.98■□□□□ 0.47
USP48-204ENST00000400301 UGT2B17O75795 530 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 C9P02748 559 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 PAICSP22234 425 aaKnown RBP17.98■□□□□ 0.47
USP48-204ENST00000400301 NUDT6P53370 316 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 TUBA3CQ13748 450 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 HEPACAMQ14CZ8 416 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 GPR26Q8NDV2 337 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 IRF7Q92985 503 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 PCDHB14Q9Y5E9 798 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 MAGED1Q9Y5V3 778 aaPredicted RBP17.98■□□□□ 0.47
USP48-204ENST00000400301 PRSS21Q9Y6M0 314 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 OR1F1O43749 312 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 HPRP00739 348 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 SLC14A2Q15849 920 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 DCST1Q5T197 706 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 YIPF2Q9BWQ6 316 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 C1QTNF7Q9BXJ2 289 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 MARCH5Q9NX47 278 aa17.98■□□□□ 0.47
USP48-204ENST00000400301 A0A0G2JN53 185 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 EFCAB9A8MZ26 197 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 SLC22A1O15245 554 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 FGBP02675 491 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 PLA2G16P53816 162 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 TMEM115Q12893 351 aaPredicted RBP17.97■□□□□ 0.47
USP48-204ENST00000400301 GRM2Q14416 872 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 C9orf64Q5T6V5 341 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 ZFYVE19Q96K21 471 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 GPATCH1Q9BRR8 931 aaKnown RBP17.97■□□□□ 0.47
USP48-204ENST00000400301 POP7O75817 140 aaKnown RBP17.97■□□□□ 0.47
USP48-204ENST00000400301 SRCP12931 536 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 SPINT3P49223 89 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 MOGQ16653 247 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 SUSD1Q6UWL2 747 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 MACC1Q6ZN28 852 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 HS3ST5Q8IZT8 346 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 SMYD1Q8NB12 490 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 SLC43A3Q8NBI5 491 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 IPCEF1Q8WWN9 437 aaPredicted RBP17.97■□□□□ 0.47
USP48-204ENST00000400301 ZNF514Q96K75 400 aaPredicted RBP17.97■□□□□ 0.47
USP48-204ENST00000400301 DPH2Q9BQC3 489 aaPredicted RBP17.97■□□□□ 0.47
USP48-204ENST00000400301 CYP7B1O75881 506 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 CYBRD1Q53TN4 286 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 Q6ZSR9 355 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 CARM1Q86X55 608 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 NUS1Q96E22 293 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 TTLL2Q9BWV7 592 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 EQTNQ9NQ60 294 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 LHX3Q9UBR4 397 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 LYVE1Q9Y5Y7 322 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 ARNTLO00327 626 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 PLOD2O00469 737 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 CLPXO76031 633 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 TPP2P29144 1249 aaPredicted RBP17.97■□□□□ 0.47
USP48-204ENST00000400301 CSNK2BP67870 215 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 MRPL28Q13084 256 aaKnown RBP17.97■□□□□ 0.47
USP48-204ENST00000400301 DOC2AQ14183 400 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 AMZ2Q86W34 360 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 EPHX4Q8IUS5 362 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 CDK20Q8IZL9 346 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 C19orf18Q8NEA5 215 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 OR2T11Q8NH01 316 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 FIBINQ8TAL6 211 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 PXYLP1Q8TE99 480 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 SORCS1Q8WY21 1168 aa17.97■□□□□ 0.47
USP48-204ENST00000400301 MYO7AQ13402 2215 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 CD1EP15812 388 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 PTX3P26022 381 aaPredicted RBP17.96■□□□□ 0.47
USP48-204ENST00000400301 CDK6Q00534 326 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 GNA13Q14344 377 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 LIPJQ5W064 366 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 GPR65Q8IYL9 337 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 APIPQ96GX9 242 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 CCDC3Q9BQI4 270 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 PCDHA9Q9Y5H5 950 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 PLK4O00444 970 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 ACADMP11310 421 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 JUPP14923 745 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 TAS2R50P59544 299 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 IL18R1Q13478 541 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 SF1Q15637 639 aaKnown RBP17.96■□□□□ 0.47
USP48-204ENST00000400301 KIAA1614Q5VZ46 1190 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 CHST14Q8NCH0 376 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 BIRC8Q96P09 236 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 INPP5KQ9BT40 448 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 C11orf16Q9NQ32 467 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 ZNF232Q9UNY5 417 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 CEPT1Q9Y6K0 416 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 LSM1O15116 133 aaKnown RBP17.96■□□□□ 0.47
USP48-204ENST00000400301 AP2A2O94973 939 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 MFN2O95140 757 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 CLTBP09497 229 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 TFPTP0C1Z6 253 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 MPC1LP0DKB6 136 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 FAM189BP81408 668 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 MEF2AQ02078 507 aaPredicted RBP17.96■□□□□ 0.47
USP48-204ENST00000400301 SELPLGQ14242 412 aa17.96■□□□□ 0.47
USP48-204ENST00000400301 PRAMEF14Q5SWL7 426 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms