RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 DTD2Q96FN9 168 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 TSPAN17Q96FV3 270 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 SMARCD1Q96GM5 515 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 NAF1Q96HR8 494 aaKnown RBP5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 ZSWIM3Q96MP5 696 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 HAPLN3Q96S86 360 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 SECISBP2Q96T21 854 aaKnown RBP5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 ZBTB18Q99592 522 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 TUBA1CQ9BQE3 449 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 INPP5KQ9BT40 448 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 ABHD6Q9BV23 337 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 UBXN6Q9BZV1 441 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 TRIM2Q9C040 744 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 RAB17Q9H0T7 212 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 MRPL18Q9H0U6 180 aaKnown RBP5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 GSTO2Q9H4Y5 243 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 XKR8Q9H6D3 395 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 ECT2Q9H8V3 914 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 KIF9Q9HAQ2 790 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 RANGRFQ9HD47 186 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 SLC6A13Q9NSD5 602 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 CISHQ9NSE2 258 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 VPS18Q9P253 973 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 WNT16Q9UBV4 365 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 KLQ9UEF7 1012 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 HMGXB4Q9UGU5 601 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 A4GNTQ9UNA3 340 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 KCNK6Q9Y257 313 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 NCANO14594 1321 aa5.23□□□□□ -1.57
HMGB3P7-201ENST00000400214 A0A087WZY1 265 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 TRBV2A0A0J9YWF9 115 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 FAM95CA0A1B0GW59 222 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 TARSL2A2RTX5 802 aaKnown RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 GSAPA4D1B5 854 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 PMS2P1A4D2B8 440 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 TMEM221A6NGB7 291 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 CXorf49A8MYA2 514 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 HHLA1C9JL84 531 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 F8VP50 259 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 F8W735 103 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 M0R296 226 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 CLDN5O00501 218 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 MED7O43513 233 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 LCATP04180 440 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 PAEPP09466 180 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ZDHHC11BP0C7U3 371 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 IL7RP16871 459 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 PSMC3P17980 439 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 FSTP19883 344 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ACO1P21399 889 aaKnown RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 DNASE1P24855 282 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 MAP4P27816 1152 aaKnown RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 GABRR2P28476 465 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 CORO1AP31146 461 aaKnown RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 UQCRC1P31930 480 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ARHGAP25P42331 645 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 PTPN9P43378 593 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 GLRBP48167 497 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 CLK3P49761 638 aaKnown RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 CACNA2D1P54289 1103 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 RAD23BP54727 409 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 TAS2R50P59544 299 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 YWHAEP62258 255 aaKnown RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 DUSP2Q05923 314 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 RBPJQ06330 500 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ACSM1Q08AH1 577 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 FCHO2Q0JRZ9 810 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ABRQ12979 859 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 MTAPQ13126 283 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 OLIG2Q13516 323 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 TSTA3Q13630 321 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ZNF268Q14587 947 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 RCN1Q15293 331 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 TEAD2Q15562 447 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 SKIDA1Q1XH10 827 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 MIIPQ5JXC2 388 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 TMEM31Q5JXX7 168 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ZNF648Q5T619 568 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 VASNQ6EMK4 673 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 METAP1DQ6UB28 335 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 SCARA5Q6ZMJ2 495 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 MACC1Q6ZN28 852 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 TMEM182Q6ZP80 229 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ADAMTSL2Q86TH1 951 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ACOT1Q86TX2 421 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 ARID3BQ8IVW6 561 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 FAM219AQ8IW50 185 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 MFSD6LQ8IWD5 586 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 FAM114A1Q8IWE2 563 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 SLC15A3Q8IY34 581 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 CMTM8Q8IZV2 173 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 LINC00469Q8N7U9 141 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 C12orf29Q8N999 325 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 C11orf65Q8NCR3 313 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 SLC24A4Q8NFF2 622 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 OR8K3Q8NH51 312 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 LILRB4Q8NHJ6 448 aa5.22□□□□□ -1.57
HMGB3P7-201ENST00000400214 SLC35B2Q8TB61 432 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms