RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ZXDBP98169 803 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CREMQ03060 361 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF181Q2M3W8 571 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GCNT6Q5T4J0 391 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 Q6ZPB1 254 aaPredicted RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PAPD5Q8NDF8 572 aaKnown RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 OR5AK3PQ8NH89 298 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 EGLN2Q96KS0 407 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 YME1L1Q96TA2 773 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 FEVQ99581 238 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ACOT13Q9NPJ3 140 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 IL37Q9NZH6 218 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RHCGQ9UBD6 479 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DKK3Q9UBP4 350 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ASB1Q9Y576 335 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 M0R129 80 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PLOD3O60568 738 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GBAP04062 536 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 NSG1P42857 185 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 UGT2B15P54855 530 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GP2P55259 537 aaKnown RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 C2orf80Q0P641 193 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RUNDC3AQ59EK9 446 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 IRAK1BP1Q5VVH5 260 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PRSS55Q6UWB4 352 aaPredicted RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 LUZP2Q86TE4 346 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MRPS31Q92665 395 aaKnown RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TMEM246Q9BRR3 403 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TTYH2Q9BSA4 534 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 EMILIN2Q9BXX0 1053 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 OR51E2Q9H255 320 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 OSER1Q9NX31 292 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MS4A12Q9NXJ0 267 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 VPS29Q9UBQ0 182 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RUVBL1Q9Y265 456 aaKnown RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 LYVE1Q9Y5Y7 322 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SAP18O00422 153 aaKnown RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TLL1O43897 1013 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 KIAA0513O60268 411 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CCNB2O95067 398 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 IFNW1P05000 195 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RPLP2P05387 115 aaKnown RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TGFBR1P36897 503 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TALDO1P37837 337 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MAD2L1BPQ15013 274 aaPredicted RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DPY19L1Q2PZI1 675 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 C10orf62Q5T681 223 aaPredicted RBP10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 AGAP7PQ5VUJ5 663 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MZT2BQ6NZ67 158 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 DLEU7Q6UYE1 221 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CLECL1Q8IZS7 167 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ADAMTS16Q8TE57 1224 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RNFT2Q96EX2 444 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MAGIXQ9H6Y5 334 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PCDHGA10Q9Y5H3 936 aa10.8□□□□□ -0.68
CSGALNACT1-202ENST00000397998 A6NL46 340 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CASKO14936 926 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TPST2O60704 377 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CPNE3O75131 537 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CKMT1AP12532 417 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RYKP34925 604 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SRP54P61011 504 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ISL1P61371 349 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SF3B4Q15427 424 aaKnown RBP eCLIP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TEAD4Q15561 434 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TBRG1Q3YBR2 411 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF648Q5T619 568 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 NOXRED1Q6NXP6 359 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ELMOD1Q8N336 334 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 C1orf52Q8N6N3 182 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MAL2Q969L2 176 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF486Q96H40 463 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PKP4Q99569 1192 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TRIM45Q9H8W5 580 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 NTN4Q9HB63 628 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 INIPQ9NRY2 104 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 FLRT1Q9NZU1 646 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 OR6C70A6NIJ9 312 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 HAT1O14929 419 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GABARAPO95166 117 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SOX14O95416 240 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RAB25P57735 213 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SNRPD1P62314 119 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 PURAQ00577 322 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 GRB14Q14449 540 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 INAVAQ3KP66 663 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 USP30Q70CQ3 517 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 USP50Q70EL3 339 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 SPATC1Q76KD6 591 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ARMCX6Q7L4S7 300 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ASCC1Q8N9N2 400 aaKnown RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 TMEM169Q96HH4 297 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 MGLLQ99685 303 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ANKHQ9HCJ1 492 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 CTPS2Q9NRF8 586 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 RAD18Q9NS91 495 aa10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 ZNF624Q9P2J8 865 aaPredicted RBP10.79□□□□□ -0.68
CSGALNACT1-202ENST00000397998 COMMD3Q9UBI1 195 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms