RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SLC16A5O15375 505 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MOSPD3O75425 235 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 LINC00271P0C7V0 271 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF30P17039 623 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ABHD18Q0P651 414 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 UGT8Q16880 541 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 THOC6Q86W42 341 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DNAJB8Q8NHS0 232 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RBM4BQ9BQ04 359 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RBM4Q9BWF3 364 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 VNN3Q9NY84 501 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 HELZP42694 1942 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 A0A1W2PPW3 197 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 WNT9AO14904 365 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CYP2A6P11509 494 aaPredicted RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TIMP2P16035 220 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MAP4P27816 1152 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PIGFQ07326 219 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 NAE1Q13564 534 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TTC23Q5W5X9 447 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZCCHC8Q6NZY4 707 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF773Q6PK81 442 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 XKR5Q6UX68 686 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CLECL1Q8IZS7 167 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZCCHC7Q8N3Z6 543 aaKnown RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SVOPLQ8N434 492 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF555Q8NEP9 628 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TRIM43Q96BQ3 446 aaPredicted RBP17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 AP3M1Q9Y2T2 418 aa17.76■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CXorf51AA0A1B0GTR3 108 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 WASH3PC4AMC7 463 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 POLR2EP19388 210 aaKnown RBP17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MATN1P21941 496 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CRHBPP24387 322 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 BDKRB1P46663 353 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 NTHL1P78549 312 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DOC2AQ14183 400 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CYP2A13Q16696 494 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CTU2Q2VPK5 515 aaKnown RBP17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FGD3Q5JSP0 725 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 HENMT1Q5T8I9 393 aaKnown RBP17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PLPP4Q5VZY2 271 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF621Q6ZSS3 439 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RAVER1Q8IY67 606 aaKnown RBP17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZBBXA8MT70 800 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FAM47E-STBD1D6RA91 191 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FPGTO14772 594 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 KPNA5O15131 536 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SLCO2B1O94956 709 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CPSF4O95639 269 aaKnown RBP17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ENGP17813 658 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 AGXTP21549 392 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DCKP27707 260 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PBLDP30039 288 aaPredicted RBP17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SYTL3Q4VX76 610 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FAM9CQ8IZT9 166 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RASGEF1AQ8N9B8 481 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PJA1Q8NG27 643 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 OR5K1Q8NHB7 308 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CSGALNACT1Q8TDX6 532 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CHPT1Q8WUD6 406 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FBXL8Q96CD0 374 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 HHIPQ96QV1 700 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 BARD1Q99728 777 aaKnown RBP17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 AASDHPPTQ9NRN7 309 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 VPS29Q9UBQ0 182 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ITM2BQ9Y287 266 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 BTBD3Q9Y2F9 522 aa17.75■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF701M0R085 212 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CLIC1O00299 241 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 YY2O15391 372 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RECQL5O94762 991 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DIRAS1O95057 198 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FTH1P02794 183 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 GSTM1P09488 218 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 COX7A2P14406 83 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PRPS1L1P21108 318 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PCYT1AP49585 367 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CBX2Q14781 532 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 AGTRAPQ6RW13 159 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZDHHC21Q8IVQ6 265 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 GPR65Q8IYL9 337 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CHPFQ8IZ52 775 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CHDHQ8NE62 594 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 WDR20Q8TBZ3 569 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 NELL1Q92832 810 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MRGPRX3Q96LB0 322 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZSWIM3Q96MP5 696 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RDH12Q96NR8 316 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 OR4K3Q96R72 315 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DPH2Q9BQC3 489 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MAGIXQ9H6Y5 334 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 USE1Q9NZ43 259 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ABCG2Q9UNQ0 655 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 EVPLLA8MZ36 301 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MITFO75030 526 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ETHE1O95571 254 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RHOP08100 348 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 WNT3P56703 355 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CD47Q08722 323 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms