RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 SNX7Q9UNH6 387 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 FAM25EA8MYX2 175 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 NME4O00746 187 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 KLK1P06870 262 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 CD1DP15813 335 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 CD247P20963 164 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 IGFBP6P24592 240 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 OMPP47874 163 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ABHD18Q0P651 414 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 E2F2Q14209 437 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 LCN1P1Q5VSP4 162 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 STEAP4Q687X5 459 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 IKBIPQ70UQ0 350 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 IQCHQ86VS3 1027 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 RGL4Q8IZJ4 473 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 LINC01465Q8N7H1 131 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 DRAXINQ8NBI3 349 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ZCCHC10Q8TBK6 192 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 IGSF8Q969P0 613 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 HEPHQ9BQS7 1158 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 KLHL31Q9H511 634 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 SUV39H2Q9H5I1 410 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 TUBA8Q9NY65 449 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 PCDHB3Q9Y5E6 796 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 TRBC2A0A5B9 178 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 ILVBLA1L0T0 632 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 PPP6CO00743 305 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 SEPT4O43236 478 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 TSPAN9O75954 239 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 ITGB1P05556 798 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 FPR1P21462 350 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 AVPR1BP47901 424 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 CLCN4P51793 760 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 RPL26P61254 145 aaKnown RBP10.46□□□□□ -0.73
CCDC40-204ENST00000397545 CDKL1Q00532 357 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF404Q494X3 552 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 BICRALQ6AI39 1079 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 OR52E8Q6IFG1 317 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 FAM220AQ7Z4H9 259 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF280BQ86YH2 543 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 PPP1R14AQ96A00 147 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 RIOK2Q9BVS4 552 aaKnown RBP10.46□□□□□ -0.73
CCDC40-204ENST00000397545 C1QTNF7Q9BXJ2 289 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 ADAMTS10Q9H324 1103 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 TLE6Q9H808 572 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 ANKRA2Q9H9E1 313 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 DIABLOQ9NR28 239 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 SOHLH2Q9NX45 425 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 DPP7Q9UHL4 492 aa10.46□□□□□ -0.73
CCDC40-204ENST00000397545 SLC35F4A4IF30 521 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 PCP4L1A6NKN8 68 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 GTPBP1O00178 669 aaKnown RBP10.46□□□□□ -0.74
CCDC40-204ENST00000397545 MAFKO60675 156 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 CCNDBP1O95273 360 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 PCCBP05166 539 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 NT5EP21589 574 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 MAT2AP31153 395 aaKnown RBP10.46□□□□□ -0.74
CCDC40-204ENST00000397545 CD68P34810 354 aaPredicted RBP10.46□□□□□ -0.74
CCDC40-204ENST00000397545 LEPRP48357 1165 aaKnown RBP10.46□□□□□ -0.74
CCDC40-204ENST00000397545 FOXM1Q08050 763 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 RGS1Q08116 209 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 SERINC3Q13530 473 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 UBXN11Q5T124 520 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 C7orf61Q8IZ16 206 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 ARNTL2Q8WYA1 636 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 HERC2P3Q9BVR0 1158 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 ELL3Q9HB65 397 aaPredicted RBP10.46□□□□□ -0.74
CCDC40-204ENST00000397545 ADAP2Q9NPF8 381 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 DNAJC27Q9NZQ0 273 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 ERVK-18Q9QC07 812 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 ZNF282Q9UDV7 671 aaPredicted RBP10.46□□□□□ -0.74
CCDC40-204ENST00000397545 GJD2Q9UKL4 321 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 CFL2Q9Y281 166 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 NCKAP1Q9Y2A7 1128 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 STON1Q9Y6Q2 735 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 CACNA1CQ13936 2221 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 B4GAT1O43505 415 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 F2P00734 622 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 JUNP05412 331 aaKnown RBP10.46□□□□□ -0.74
CCDC40-204ENST00000397545 CAPN3P20807 821 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 PSMD8P48556 350 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 HTR6P50406 440 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 PHC1P78364 1004 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 MYBPC1Q00872 1141 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 DPY19L1Q2PZI1 675 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 IDNKQ5T6J7 187 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 NEK5Q6P3R8 708 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 FAM129CQ86XR2 697 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 KBTBD7Q8WVZ9 684 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 FCGR1BQ92637 280 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 TMCO6Q96DC7 493 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 TSGA13Q96PP4 275 aa10.46□□□□□ -0.74
CCDC40-204ENST00000397545 PRAMEF33A0A0G2JMD5 474 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 OR6C70A6NIJ9 312 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 CAPN14A8MX76 684 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 SLC31A1O15431 190 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 TLX2O43763 284 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 PRAMEF10O60809 474 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 GABBR2O75899 941 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 RFC2P35250 354 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms