RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MEP1AQ16819 746 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 Q5BKY6 102 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TPRG1LQ5T0D9 272 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SPOUT1Q5T280 376 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 C8orf82Q6P1X6 216 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 FUT10Q6P4F1 479 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ENPP6Q6UWR7 440 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PLCZ1Q86YW0 608 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 KLHDC8BQ8IXV7 354 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 WFDC5Q8TCV5 224 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 LKAAEAR1Q8TD35 194 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 CD200R1Q8TD46 325 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 BCL7CQ8WUZ0 217 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 FAR1Q8WVX9 515 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 NCLNQ969V3 563 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 LGALS12Q96DT0 336 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GIMAP5Q96F15 307 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ZNF599Q96NL3 588 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 RDH12Q96NR8 316 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TFB2MQ9H5Q4 396 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 IKZF5Q9H5V7 419 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 KAT8Q9H7Z6 458 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 NLE1Q9NVX2 485 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 FBXL12Q9NXK8 326 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GLTPQ9NZD2 209 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 EHD3Q9NZN3 535 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 OPTCQ9UBM4 332 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 MKLN1Q9UL63 735 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 LRFN2Q9ULH4 789 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 Q9Y3F1 56 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 NAALAD2Q9Y3Q0 740 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PCDHB7Q9Y5E2 793 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TRIOO75962 3097 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 IGLV3-10A0A075B6K4 115 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 LCHNA4D1U4 455 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SLC38A8A6NNN8 435 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 FAM25EA8MYX2 175 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 EFCAB9A8MZ26 197 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 LOC110117498-PIK3R3F6TDL0 507 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 TSPAN4O14817 238 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SMAD6O43541 496 aaKnown RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 SCO1O75880 301 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 DIRAS1O95057 198 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SNX4O95219 450 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 CLDN7O95471 211 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PRAMEF1O95521 474 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 TSPAN12O95859 305 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 FGF4P08620 206 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 CYP4B1P13584 511 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ITGA2P17301 1181 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 GJA1P17302 382 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 HRH2P25021 359 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 DNAJB1P25685 340 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ZNF140P52738 457 aaPredicted RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 CASP9P55211 416 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 RHOAP61586 193 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ARF5P84085 180 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 RHAGQ02094 409 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 EMX1Q04741 257 aaPredicted RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 DSC1Q08554 894 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 GNA13Q14344 377 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 FAM174BQ3ZCQ3 159 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SHEQ5VZ18 495 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 RGMBQ6NW40 437 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 GCNT7Q6ZNI0 430 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PLEKHM3Q6ZWE6 761 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 HDDC2Q7Z4H3 204 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 CDH24Q86UP0 819 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 AMIGO1Q86WK6 493 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 CCDC117Q8IWD4 279 aaPredicted RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 DTWD1Q8N5C7 304 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PARP16Q8N5Y8 322 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 AMER2Q8N7J2 671 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 FBXO22Q8NEZ5 403 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 TTLQ8NG68 377 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ZFAND1Q8TCF1 268 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.88□□□□□ -1.63
SSR1-202ENST00000397511 UROC1Q96N76 676 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PPP1R2P1Q96PQ5 205 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 TRIB3Q96RU7 358 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 MYOCQ99972 504 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 DERL2Q9GZP9 239 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 DCSTAMPQ9H295 470 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ASB8Q9H765 288 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ZNF556Q9HAH1 456 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PDFQ9HBH1 243 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 B3GNT2Q9NY97 397 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 VAPAQ9P0L0 249 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 RAPGEFL1Q9UHV5 662 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 CD84Q9UIB8 345 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PNMA8BQ9ULN7 279 aaPredicted RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.88□□□□□ -1.63
SSR1-202ENST00000397511 PKP3Q9Y446 797 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PCDHGB6Q9Y5F9 930 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PCDHGB1Q9Y5G3 927 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PCDHGA10Q9Y5H3 936 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PCDHA9Q9Y5H5 950 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 KCNE2Q9Y6J6 123 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PRSS21Q9Y6M0 314 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms