RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 NODALQ96S42 347 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 NTMT1Q9BV86 223 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 C1QTNF3Q9BXJ4 246 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 CLMPQ9H6B4 373 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 TRIM39Q9HCM9 518 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 CTPS2Q9NRF8 586 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 TRBV23OR9-2A0A075B6M9 112 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 ANTXRLA6NF34 631 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 ANKDD1BA6NHY2 528 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 FADS2P1A8MWK0 482 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 K7ESM1 405 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SUV39H1O43463 412 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 FGBP02675 491 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 FSHRP23945 695 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 CLK1P49759 484 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 RPS26P62854 115 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 UTS2BQ765I0 119 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SPRED1Q7Z699 444 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 MSRB3Q8IXL7 192 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZNF740Q8NDX6 193 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 CSGALNACT1Q8TDX6 532 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 STON2Q8WXE9 905 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 GLYATL1Q969I3 302 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 UHRF1Q96T88 793 aaPredicted RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SLC29A3Q9BZD2 475 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 KAT8Q9H7Z6 458 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 NTN4Q9HB63 628 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SLC52A3Q9NQ40 469 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SAMD4AQ9UPU9 718 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 DOCK4Q8N1I0 1966 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 NUMA1Q14980 2115 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 LOC100506127A0A0U1RQW1 187 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 M0R129 80 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 ARNTLO00327 626 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 POP7O75817 140 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 TIMP2P16035 220 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 MAGP20916 626 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 PRPS1L1P21108 318 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 HPCAL1P37235 193 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 CDH12P55289 794 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 HPCAP84074 193 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SPIBQ01892 262 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 RAPSNQ13702 412 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 NFE2L1Q14494 772 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 SYT16Q17RD7 645 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 ANKDD1AQ495B1 522 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 TNFAIP8L2Q6P589 184 aaPredicted RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 BRAT1Q6PJG6 821 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 GET4Q7L5D6 327 aaPredicted RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 PTRH1Q86Y79 214 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 GIPC3Q8TF64 312 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 NEIL2Q969S2 332 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 GTPBP3Q969Y2 492 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 CMTM7Q96FZ5 175 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 PKP4Q99569 1192 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 OSBPL6Q9BZF3 934 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 KCNH6Q9H252 994 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 THG1LQ9NWX6 298 aaKnown RBP10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 UNC80Q8N2C7 3258 aa10.1□□□□□ -0.79
CPSF1P1-201ENST00000397477 H0YJX3 145 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TPST2O60704 377 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 INMTO95050 263 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 C6orf47O95873 294 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 CXCL10P02778 98 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ALPLP05186 524 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 MATN1P21941 496 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 SLC6A11P48066 632 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 SLC7A9P82251 487 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 DUOXA1Q1HG43 343 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 CAPN13Q6MZZ7 669 aaPredicted RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 PIWIL3Q7Z3Z3 882 aaKnown RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TCAIMQ8N3R3 496 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TTC29Q8NA56 475 aaPredicted RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 OR5K1Q8NHB7 308 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ATL1Q8WXF7 558 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 DTNBP1Q96EV8 351 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 LHPPQ9H008 270 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ADPRHL2Q9NX46 363 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 IMPAD1Q9NX62 359 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 STOX2Q9P2F5 926 aaPredicted RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TRPC4Q9UBN4 977 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ANKRD28O15084 1053 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 GNRH1P01148 92 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ETFAP13804 333 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 MYOGP15173 224 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 AMD1P17707 334 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 CD247P20963 164 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 MAT2AP31153 395 aaKnown RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 GPC1P35052 558 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 HNMTP50135 292 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TAS2R50P59544 299 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 C6orf141Q5SZD1 244 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TMEM215Q68D42 235 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 OR2T5Q6IEZ7 315 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 MED27Q6P2C8 311 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 FAM20CQ8IXL6 584 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 FAM9CQ8IZT9 166 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 OR2T29Q8NH02 315 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 SUSD6Q92537 303 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms