RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TCTE1Q5JU00 501 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 SULT1C3Q6IMI6 304 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 FBXO42Q6P3S6 717 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 PLD3Q8IV08 490 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 OR4N4Q8N0Y3 316 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 PLD6Q8N2A8 252 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 RHEBL1Q8TAI7 183 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 KIAA1143Q96AT1 154 aaPredicted RBP20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 TSNARE1Q96NA8 513 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 LRFN5Q96NI6 719 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 ZNF285Q96NJ3 590 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 GPR78Q96P69 363 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 SYNPO2LQ9H987 977 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 GPN2Q9H9Y4 310 aaPredicted RBP20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 LHX9Q9NQ69 397 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 STARD5Q9NSY2 213 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 PCMTD2Q9NV79 361 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 TBK1Q9UHD2 729 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 PADI1Q9ULC6 663 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 SLC22A14Q9Y267 594 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 DYRK1BQ9Y463 629 aa20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 MDC1Q14676 2089 aaKnown RBP20.28■□□□□ 0.84
TSPAN4-206ENST00000397408 UBXN8O00124 270 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 SRPX2O60687 465 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 EIF2S1P05198 315 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 HBQ1P09105 142 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 RORAP35398 523 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 GDF5P43026 501 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 TMPRSS3P57727 454 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 CSNK1G2P78368 415 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 NAA30Q147X3 362 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 KLHDC8AQ8IYD2 350 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 SLC5A11Q8WWX8 675 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 MR1Q95460 341 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 CAVIN3Q969G5 261 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 NEIL2Q969S2 332 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 CRELD1Q96HD1 420 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 NDC1Q9BTX1 674 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 AKIRIN1Q9H9L7 192 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 CPNE5Q9HCH3 593 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 CROTQ9UKG9 612 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 SRPK3Q9UPE1 567 aa20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 KMT2BQ9UMN6 2715 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-206ENST00000397408 CCDC189A1A4V9 331 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 SMIM23A6NLE4 172 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 SYCE1LA8MT33 242 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 H0YGG7 62 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 MEN1O00255 615 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 TAPBPO15533 448 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 RFPL1O75677 317 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 IPO13O94829 963 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 KLK3P07288 261 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 SLCO1A2P46721 670 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 HSPA7P48741 367 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 ARF3P61204 181 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 RELAQ04206 551 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 GRM7Q14831 915 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 COL28A1Q2UY09 1125 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 WASHC2DQ5SRD0 308 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 RHBDD2Q6NTF9 364 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 CCDC81Q6ZN84 652 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 TIFABQ6ZNK6 161 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 DSELQ8IZU8 1212 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 TTC29Q8NA56 475 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 CT55Q8WUE5 264 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 RERGQ96A58 199 aaPredicted RBP20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 ESAMQ96AP7 390 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 CABS1Q96KC9 395 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 OR2A5Q96R48 311 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 CNOT10Q9H9A5 744 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 PPCSQ9HAB8 311 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 TXLNGQ9NUQ3 528 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 ZNF358Q9NW07 568 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 DHCR7Q9UBM7 475 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 PTBP2Q9UKA9 531 aaKnown RBP20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 RAB21Q9UL25 225 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 KCNE2Q9Y6J6 123 aa20.27■□□□□ 0.83
TSPAN4-206ENST00000397408 COL6A2P12110 1019 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 WT1P19544 449 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 GGT5P36269 586 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 DLSTP36957 453 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 CCR8P51685 355 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 TSNAXIP1Q2TAA8 658 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 TECRLQ5HYJ1 363 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 CATSPEREQ5SY80 951 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 C1orf189Q5VU69 101 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 FAM199XQ6PEV8 388 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 TMPRSS11BQ86T26 416 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 CSNK1A1LQ8N752 337 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 ABHD11Q8NFV4 315 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 EPS8L3Q8TE67 593 aaKnown RBP20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 SCYL1Q96KG9 808 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 ENAMQ9NRM1 1142 aa20.26■□□□□ 0.83
TSPAN4-206ENST00000397408 FER1L5A0AVI2 2057 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 FITM1A5D6W6 292 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 EFSO43281 561 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 STK16O75716 305 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 MTHFD2P13995 350 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 GRK3P35626 688 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 GCGRP47871 477 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms