RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ZNF33BQ06732 778 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 NAA25Q14CX7 972 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 MANEAQ5SRI9 462 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 LIPMQ5VYY2 423 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 LIPJQ5W064 366 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 FAM219BQ5XKK7 198 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 TMEM214Q6NUQ4 689 aaKnown RBP10.15□□□□□ -0.78
NUP98-205ENST00000397007 GALNT15Q8N3T1 639 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 Q8N9G6 341 aaPredicted RBP10.15□□□□□ -0.78
NUP98-205ENST00000397007 FAM8A1Q9UBU6 413 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 TRPS1Q9UHF7 1281 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 CLCA2Q9UQC9 943 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 SLC22A14Q9Y267 594 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 ITPR1Q14643 2758 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 IGLV3-12A0A075B6K2 115 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
NUP98-205ENST00000397007 PRR35P0CG20 571 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 AHRP35869 848 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 EFNA3P52797 238 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 SLC12A2P55011 1212 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 CATSPEREQ5SY80 951 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 FRMPD2BQ6IN97 320 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 CAPN13Q6MZZ7 669 aaPredicted RBP10.15□□□□□ -0.78
NUP98-205ENST00000397007 ERMP1Q7Z2K6 904 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 UBE3DQ7Z6J8 389 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 SRRM1Q8IYB3 904 aaKnown RBP10.15□□□□□ -0.78
NUP98-205ENST00000397007 MRRFQ96E11 262 aaKnown RBP10.15□□□□□ -0.78
NUP98-205ENST00000397007 SLC46A1Q96NT5 459 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 FAM117AQ9C073 453 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 CIDEBQ9UHD4 219 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 TAC3Q9UHF0 121 aa10.15□□□□□ -0.78
NUP98-205ENST00000397007 TNPO3Q9Y5L0 923 aaKnown RBP10.15□□□□□ -0.78
NUP98-205ENST00000397007 STK16O75716 305 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 CCNDBP1O95273 360 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 TYRP1P17643 537 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 ID4P47928 161 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 PDK4Q16654 411 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 COX15Q7KZN9 410 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 TRIM73Q86UV7 250 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 SLC22A9Q8IVM8 553 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 C10orf107Q8IVU9 208 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 OR1L3Q8NH93 324 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 DRC3Q9H069 523 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 CCDC88CQ9P219 2028 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 CLDN16Q9Y5I7 305 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 IKBKGQ9Y6K9 419 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 KMT2BQ9UMN6 2715 aaPredicted RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 CCDC187A0A096LP49 1063 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 ISM1B1AKI9 464 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 NVLO15381 856 aaKnown RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 ZW10O43264 779 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 MYZAPP0CAP1 466 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 HSPA7P48741 367 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 ERVPABLB-1P60509 514 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 SH3BP2P78314 561 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 XKR7Q5GH72 579 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 KANK2Q63ZY3 851 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 LETMD1Q6P1Q0 360 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 TRIM48Q8IWZ4 208 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 FAM20CQ8IXL6 584 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 PTGR2Q8N8N7 351 aaPredicted RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 SLC38A9Q8NBW4 561 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 OR52B6Q8NGF0 335 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 PTCD3Q96EY7 689 aaKnown RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 TDRKHQ9Y2W6 561 aaKnown RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 EP300Q09472 2414 aaPredicted RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 SLC9B1P1A6NJY1 282 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 FOXE1O00358 373 aaPredicted RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 RGS16O15492 202 aaPredicted RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 EBLN1P0CF75 366 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 C1GALT1C1LP0DN25 315 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 ALOX15P16050 662 aaPredicted RBP10.14□□□□□ -0.79
NUP98-205ENST00000397007 DAB2P98082 770 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 TARDBPQ13148 414 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUP98-205ENST00000397007 NAE1Q13564 534 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 GTF2H2Q13888 395 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 SPIDRQ14159 915 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 GTF2H2CQ6P1K8 395 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 FIGLAQ6QHK4 219 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 CCDC126Q96EE4 140 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 SLC26A1Q9H2B4 701 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 SLC22A11Q9NSA0 550 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 DNAJC11Q9NVH1 559 aa10.14□□□□□ -0.79
NUP98-205ENST00000397007 JUPP14923 745 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 MAGP20916 626 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 SAT1P21673 171 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 ALDH4A1P30038 563 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 OCRLQ01968 901 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 YOD1Q5VVQ6 348 aaPredicted RBP10.13□□□□□ -0.79
NUP98-205ENST00000397007 FAM92BQ6ZTR7 304 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 TRIM46Q7Z4K8 759 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 SYVN1Q86TM6 617 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 FBXO39Q8N4B4 442 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 PYCR2Q96C36 320 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 MOCOSQ96EN8 888 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 TGM7Q96PF1 710 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 GATA5Q9BWX5 397 aaPredicted RBP10.13□□□□□ -0.79
NUP98-205ENST00000397007 CAPS2Q9BXY5 557 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 ATG10Q9H0Y0 220 aa10.13□□□□□ -0.79
NUP98-205ENST00000397007 ARGLU1Q9NWB6 273 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms