RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 GYPCP04921 128 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 ANXA5P08758 320 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 MSNP26038 577 aaKnown RBP7.96□□□□□ -1.13
SCFD1-202ENST00000396629 HSPA14Q0VDF9 509 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 FASTKQ14296 549 aaKnown RBP7.96□□□□□ -1.13
SCFD1-202ENST00000396629 NAA25Q14CX7 972 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 TCEAL1Q15170 157 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 SYT16Q17RD7 645 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 BTBD16Q32M84 506 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 KCTD11Q693B1 232 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 CEP128Q6ZU80 1094 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 BBS12Q6ZW61 710 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 RCOR2Q8IZ40 523 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 M1APQ8TC57 530 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 LKAAEAR1Q8TD35 194 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 METTL21AQ8WXB1 218 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 RAD51AP1Q96B01 352 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 CYTH2Q99418 400 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 FERMT1Q9BQL6 677 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 UCK2Q9BZX2 261 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 VN1R1Q9GZP7 353 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 SYNPO2LQ9H987 977 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 KCNJ16Q9NPI9 418 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 ST6GALNAC2Q9UJ37 374 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 RNF6Q9Y252 685 aa7.96□□□□□ -1.13
SCFD1-202ENST00000396629 IGHV3-20A0A0C4DH32 117 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 CCDC162PA2VCL2 907 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 APOC4-APOC2K7ER74 178 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 SPOPO43791 374 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 MAN1A2O60476 641 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 PHF2O75151 1096 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 SUN1O94901 812 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 C1orf105O95561 183 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 APOC2P02655 101 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 TPH1P17752 444 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 AOAHP28039 575 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 ST13P50502 369 aaKnown RBP7.96□□□□□ -1.14
SCFD1-202ENST00000396629 LTBQ06643 244 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 HKDC1Q2TB90 917 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 LRRC8BQ6P9F7 803 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 LANCL3Q6ZV70 420 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 KATNAL2Q8IYT4 538 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 TAB3Q8N5C8 712 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-202ENST00000396629 CSNK1A1LQ8N752 337 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 HORMAD2Q8N7B1 307 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 LRRC45Q96CN5 670 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 SPATA13Q96N96 652 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 DPH7Q9BTV6 452 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 MMP25Q9NPA2 562 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 ANKRD10Q9NXR5 420 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 DNAJB12Q9NXW2 375 aaKnown RBP7.96□□□□□ -1.14
SCFD1-202ENST00000396629 C19orf25Q9UFG5 118 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-202ENST00000396629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.96□□□□□ -1.143e-6■□□□□ 10.3
SCFD1-202ENST00000396629 ABCA4P78363 2273 aa7.96□□□□□ -1.14
SCFD1-202ENST00000396629 A0A0A6YYC8 382 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-202ENST00000396629 A0A0U1RQJ8 604 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 FAM90A27PA6NNH2 459 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 GABRR3A8MPY1 467 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 I3L1I5 382 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-202ENST00000396629 KLK8O60259 260 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 NME2P1O60361 137 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 VPS26AO75436 327 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 ZWINTO95229 277 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 ZNF24P17028 368 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 NME2P22392 152 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 CMPK1P30085 196 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 PTGER1P34995 402 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 PTGS2P35354 604 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 YBX1P67809 324 aaKnown RBP7.95□□□□□ -1.14
SCFD1-202ENST00000396629 FAM53BQ14153 422 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 POU6F1Q14863 301 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 IQCB1Q15051 598 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 EXT1Q16394 746 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 CCSMST1Q4G0I0 132 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 TTC23LQ6PF05 361 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 CD163Q86VB7 1156 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 PAQR7Q86WK9 346 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 CDKL3Q8IVW4 592 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-202ENST00000396629 LGI4Q8N135 537 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 RAB42Q8N4Z0 105 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 OR2A5Q96R48 311 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 PLCD4Q9BRC7 762 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 TSSK1BQ9BXA7 367 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 DRC3Q9H069 523 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 ZNF358Q9NW07 568 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 GNPTGQ9UJJ9 305 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 SOWAHDA6NJG2 315 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 STK10O94804 968 aaKnown RBP7.95□□□□□ -1.14
SCFD1-202ENST00000396629 APOA4P06727 396 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 MAT1AQ00266 395 aaKnown RBP7.95□□□□□ -1.14
SCFD1-202ENST00000396629 MYBPHQ13203 477 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 CEBPEQ15744 281 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 ANKRD37Q7Z713 158 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 BIVMQ86UB2 503 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 CPSF7Q8N684 471 aaKnown RBP7.95□□□□□ -1.14
SCFD1-202ENST00000396629 POGLUT1Q8NBL1 392 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 ACTL9Q8TC94 416 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 RND1Q92730 232 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 ALS2CR12Q96Q35 445 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 TTC1Q99614 292 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms