RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 SOWAHBA6NEL2 793 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 OR51F1A6NGY5 319 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 C1orf196B1AJZ1 125 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 HAS3O00219 553 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ABCB7O75027 752 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ITGA10O75578 1167 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 LINGO3P0C6S8 592 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SPATA31D3P0C874 917 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 FGL2Q14314 439 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SFT2D3Q587I9 215 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SPATA31D4Q6ZUB0 917 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 LRP10Q7Z4F1 713 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ANKRD23Q86SG2 305 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 FAM124AQ86V42 546 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SLC22A16Q86VW1 577 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF548Q8NEK5 533 aaPredicted RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 COL21A1Q96P44 957 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 KCNC2Q96PR1 638 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 LGR4Q9BXB1 951 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 BRD7Q9NPI1 651 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 FANCFQ9NPI8 374 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZDHHC3Q9NYG2 299 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 MARK1Q9P0L2 795 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 RIMKLBQ9ULI2 386 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 HSPB11Q9Y547 144 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SLC38A8A6NNN8 435 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 PCCBP05166 539 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 EPHX1P07099 455 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 H1F0P07305 194 aaKnown RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF823P16415 610 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 DDX6P26196 483 aaKnown RBP eCLIP10□□□□□ -0.81
LIMCH1-203ENST00000396595 RORAP35398 523 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ILF3Q12906 894 aaKnown RBP eCLIP10□□□□□ -0.81
LIMCH1-203ENST00000396595 MOGSQ13724 837 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 GANABQ14697 944 aaKnown RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 SPIN4Q56A73 249 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SYPL2Q5VXT5 272 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 FRG2Q64ET8 278 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 NUDT13Q86X67 352 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 MARCH9Q86YJ5 346 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 BPIFB1Q8TDL5 484 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZUFSPQ96AP4 578 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ARL5BQ96KC2 179 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 FRG2BQ96QU4 278 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 TUBA1CQ9BQE3 449 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF395Q9H8N7 513 aaPredicted RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 MOCS1Q9NZB8 636 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF639Q9UID6 485 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 NR2E3Q9Y5X4 410 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 MRC1P22897 1456 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 TMEM233B4DJY2 109 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ENPP3O14638 875 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ENTPD6O75354 484 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 AHSGP02765 367 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 DBIP07108 87 aaKnown RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 CPN2P22792 545 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 PLA2G16P53816 162 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 C1QTNF8P60827 252 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF404Q494X3 552 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 PSRC1Q6PGN9 363 aaPredicted RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 KCTD13Q8WZ19 329 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 ACDQ96AP0 544 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 RDH12Q96NR8 316 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 CDK15Q96Q40 435 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 SLC35A5Q9BS91 424 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 WDR6Q9NNW5 1121 aaKnown RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 MKKSQ9NPJ1 570 aaPredicted RBP10□□□□□ -0.81
LIMCH1-203ENST00000396595 CD93Q9NPY3 652 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 P2RX2Q9UBL9 471 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 GLS2Q9UI32 602 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 CDH7Q9ULB5 785 aa10□□□□□ -0.81
LIMCH1-203ENST00000396595 FXYD6-FXYD2A0A087WZ82 144 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 J3QRK9 145 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 RNASEH2AO75792 299 aaKnown RBP9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 ATP4BP51164 291 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 DGKQP52824 942 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 NRLP54845 237 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 CAP1Q01518 475 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 DUOXA1Q1HG43 343 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 IFNL1Q8IU54 200 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 SLC22A8Q8TCC7 542 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 FBXL8Q96CD0 374 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 LIN37Q96GY3 246 aaPredicted RBP9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 FXYD6Q9H0Q3 95 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 M0R2N6 131 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 ZNF33AQ06730 810 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 PAFAH1B3Q15102 231 aaKnown RBP9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 MSS51Q4VC12 460 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 COMTD1Q86VU5 262 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 AMIGO1Q86WK6 493 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 KIF18BQ86Y91 864 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 C7orf43Q8WVR3 580 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 BIRC7Q96CA5 298 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 IL4I1Q96RQ9 567 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 PIGVQ9NUD9 493 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 MSRAQ9UJ68 235 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 MED31Q9Y3C7 131 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 A0A075B6Q4 140 aa9.99□□□□□ -0.81
LIMCH1-203ENST00000396595 M0R233 179 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms