RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 OAZ3Q9UMX2 235 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 SH2B3Q9UQQ2 575 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 ASF1AQ9Y294 204 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 PRKAB1Q9Y478 270 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 PCYT1BQ9Y5K3 369 aaPredicted RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 PCM1Q15154 2024 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 PIPSLA2A3N6 862 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 CXCR6O00574 342 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 RASAL1O95294 804 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 ETHE1O95571 254 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 C1GALT1C1LP0DN25 315 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 NPPBP16860 134 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 KELP23276 732 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 PTPN6P29350 595 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 HPCAL1P37235 193 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 TRPC1P48995 793 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 RPS13P62277 151 aaKnown RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 TAP2Q03519 686 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 AGERQ15109 404 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 DUOXA1Q1HG43 343 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 CATSPEREQ5SY80 951 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 GCNT7Q6ZNI0 430 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 LRRC56Q8IYG6 542 aaPredicted RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 PHACTR4Q8IZ21 702 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 HDDC3Q8N4P3 179 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 OR7A2PQ8NGA2 310 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 NCLNQ969V3 563 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 FAM162AQ96A26 154 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 C11orf24Q96F05 449 aaPredicted RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 AURKBQ96GD4 344 aaPredicted RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 TRAPPC9Q96Q05 1148 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 TBCDQ9BTW9 1192 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 CHID1Q9BWS9 393 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 UGT2B28Q9BY64 529 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 FAM192AQ9GZU8 254 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 ZNF696Q9H7X3 374 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 TRPM6Q9BX84 2022 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 A0A1W2PP55 124 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 SCAMP2O15127 329 aaKnown RBP14.43□□□□□ -0.1
CBX3-202ENST00000396386 RPN2P04844 631 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 GSNP06396 782 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 SMIM18P0DKX4 95 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 C7P10643 843 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 TEAD1P28347 426 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 TIA1P31483 386 aaKnown RBP eCLIP14.43□□□□□ -0.19e-11■■■■□ 23.8
CBX3-202ENST00000396386 CDKN2CP42773 168 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 SOX9P48436 509 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 RAE1P78406 368 aaKnown RBP14.43□□□□□ -0.1
CBX3-202ENST00000396386 MYBPC1Q00872 1141 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 CHRNB3Q05901 458 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 LAPTM5Q13571 262 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 HIST2H2ACQ16777 129 aaPredicted RBP14.43□□□□□ -0.1
CBX3-202ENST00000396386 PRAMEF14Q5SWL7 426 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 PRAMEF13Q5VWM6 474 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 HIST2H2AA3Q6FI13 130 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 CARM1Q86X55 608 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 LAS2Q8IYD9 372 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
CBX3-202ENST00000396386 OR52E4Q8NGH9 312 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 RAD51AP1Q96B01 352 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 VPS50Q96JG6 964 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 BDH2Q9BUT1 245 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 GEMIN8Q9NWZ8 242 aaKnown RBP14.43□□□□□ -0.1
CBX3-202ENST00000396386 ADGRE2Q9UHX3 823 aa14.43□□□□□ -0.1
CBX3-202ENST00000396386 RNF103-CHMP3A0A140T963 221 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 PDLIM1O00151 329 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 FPGTO14772 594 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 PI15O43692 258 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 DEAF1O75398 565 aaPredicted RBP14.42□□□□□ -0.1
CBX3-202ENST00000396386 B3GALT4O96024 378 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 MT-ND1P03886 318 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 ANXA4P09525 319 aaPredicted RBP14.42□□□□□ -0.1
CBX3-202ENST00000396386 TNFRSF4P43489 277 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 SEC13P55735 322 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 PHEXP78562 749 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 ABHD18Q0P651 414 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 GK3PQ14409 553 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 IRF4Q15306 451 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 THEMIS2Q5TEJ8 643 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 RNF220Q5VTB9 566 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 NXPE4Q6UWF7 544 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 PHC3Q8NDX5 983 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 GPR156Q8NFN8 814 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 OR8J2Q8NGG1 315 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 OR5AR1Q8NGP9 310 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 CHTF18Q8WVB6 975 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 REXO5Q96IC2 774 aaKnown RBP14.42□□□□□ -0.1
CBX3-202ENST00000396386 RIPOR3Q96MK2 946 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 TEX101Q9BY14 249 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 ANKRD60Q9BZ19 345 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 WDR26Q9H7D7 661 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 DMRT3Q9NQL9 472 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 SERGEFQ9UGK8 458 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 LIMD1Q9UGP4 676 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 PCDHGB4Q9UN71 923 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 PCDHGB5Q9Y5G0 923 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 DNMT3AQ9Y6K1 912 aaPredicted RBP14.42□□□□□ -0.1
CBX3-202ENST00000396386 TRANK1O15050 2925 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 GPR89AB7ZAQ6 455 aa14.42□□□□□ -0.1
CBX3-202ENST00000396386 FOXE1O00358 373 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms