RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 OR7G3Q8NG95 312 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 OR5K1Q8NHB7 308 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 CHTF18Q8WVB6 975 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 SMG7Q92540 1137 aaKnown RBP16.23■□□□□ 0.19
NUP50-202ENST00000396096 GFM2Q969S9 779 aaKnown RBP16.23■□□□□ 0.19
NUP50-202ENST00000396096 SOX17Q9H6I2 414 aaPredicted RBP16.23■□□□□ 0.19
NUP50-202ENST00000396096 SIRT5Q9NXA8 310 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 UTS2RQ9UKP6 389 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 KCNE2Q9Y6J6 123 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 MYO7AQ13402 2215 aa16.23■□□□□ 0.19
NUP50-202ENST00000396096 KIF26AQ9ULI4 1882 aaPredicted RBP16.23■□□□□ 0.19
NUP50-202ENST00000396096 C17orf113A0A1B0GUU1 675 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 SCAMP2O15127 329 aaKnown RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 SEC24DO94855 1032 aaPredicted RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 MYCLP1P12525 358 aaPredicted RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 COX7A2P14406 83 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 SLC5A2P31639 672 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 VIPR2P41587 438 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 SLC6A11P48066 632 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 SLC14A1Q13336 389 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 ELAVL3Q14576 367 aaKnown RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 ZBED5Q49AG3 693 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 FNDC3BQ53EP0 1204 aaKnown RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 SPIN4Q56A73 249 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 CPZQ66K79 652 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 PNPT1Q8TCS8 783 aaKnown RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 ZNF480Q8WV37 535 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 REPS1Q96D71 796 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 ZNF514Q96K75 400 aaPredicted RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 PHF12Q96QT6 1004 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 PANX1Q96RD7 426 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 SH3GL3Q99963 347 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 RBM4BQ9BQ04 359 aaKnown RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 RBM4Q9BWF3 364 aaKnown RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 BTNL2Q9UIR0 455 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 SAMD4AQ9UPU9 718 aaKnown RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 COQ6Q9Y2Z9 468 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 MAGED1Q9Y5V3 778 aaPredicted RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 MAGEB17A8MXT2 336 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 ZNF701M0R085 212 aaPredicted RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 CLIC1O00299 241 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 EPN2O95208 641 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 ETHE1O95571 254 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 ADRB3P13945 408 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 PBLDP30039 288 aaPredicted RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 HLCSP50747 726 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 ESRRGP62508 458 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 TTC23Q5W5X9 447 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 CAPN13Q6MZZ7 669 aaPredicted RBP16.22■□□□□ 0.19
NUP50-202ENST00000396096 CES5AQ6NT32 575 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 ZZZ3Q8IYH5 903 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 CPA6Q8N4T0 437 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 FAM129BQ96TA1 746 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 SGPP1Q9BX95 441 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 TRIM39Q9HCM9 518 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 AASDHPPTQ9NRN7 309 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 DEC1Q9P2X7 70 aa16.22■□□□□ 0.19
NUP50-202ENST00000396096 KCNK5O95279 499 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 C6P13671 934 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 ENGP17813 658 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 DCTP40126 519 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 BIRC2Q13490 618 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 DDX39BQ13838 428 aaKnown RBP16.21■□□□□ 0.19
NUP50-202ENST00000396096 VMACQ2NL98 169 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 TMEM259Q4ZIN3 620 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 FAM78AQ5JUQ0 283 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 MED27Q6P2C8 311 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 GALNT18Q6P9A2 607 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 GPR141Q7Z602 305 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 CFAP206Q8IYR0 622 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 CHPFQ8IZ52 775 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 C1orf52Q8N6N3 182 aaKnown RBP16.21■□□□□ 0.19
NUP50-202ENST00000396096 HUS1BQ8NHY5 278 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 NEIL2Q969S2 332 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 PPP1R16AQ96I34 528 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 MUS81Q96NY9 551 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 SPATA9Q9BWV2 254 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 NPLQ9BXD5 320 aaPredicted RBP16.21■□□□□ 0.19
NUP50-202ENST00000396096 OR2AG1Q9H205 316 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 TMEM245Q9H330 911 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 TOR3AQ9H497 397 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 EHD1Q9H4M9 534 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 GPR34Q9UPC5 381 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 PCM1Q15154 2024 aa16.21■□□□□ 0.19
NUP50-202ENST00000396096 K7ESM1 405 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 FOXE1O00358 373 aaPredicted RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 GNGT2O14610 69 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 LAMP1P11279 417 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 HLA-EP13747 358 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 TTKP33981 857 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 GPR1P46091 355 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 IST1P53990 364 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 TBPL1P62380 186 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 LRRC74AQ0VAA2 488 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 ZIK1Q3SY52 487 aaPredicted RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 LPCAT2Q7L5N7 544 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 UBE2Q1Q7Z7E8 422 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 LAS2Q8IYD9 372 aa16.2■□□□□ 0.18
NUP50-202ENST00000396096 LRRC56Q8IYG6 542 aaPredicted RBP16.2■□□□□ 0.18
NUP50-202ENST00000396096 OR9A1PQ8NGU1 263 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms