RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 GNAZP19086 355 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 CAPN3P20807 821 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 JAK1P23458 1154 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 HSD17B2P37059 387 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 ZFP36L2P47974 494 aaKnown RBP18.63■□□□□ 0.57
LMNB1-202ENST00000395354 POLR2JP52435 117 aaKnown RBP18.63■□□□□ 0.57
LMNB1-202ENST00000395354 NME5P56597 212 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 UFM1P61960 85 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 FOXM1Q08050 763 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 CSTF3Q12996 717 aaKnown RBP18.63■□□□□ 0.57
LMNB1-202ENST00000395354 PRKG2Q13237 762 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 PLA2G2CQ5R387 149 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 CACHD1Q5VU97 1274 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 PRAMEF9Q5VWM5 478 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 CHST15Q7LFX5 561 aaPredicted RBP18.63■□□□□ 0.57
LMNB1-202ENST00000395354 DCUN1D3Q8IWE4 304 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 PHACTR4Q8IZ21 702 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 FAM9CQ8IZT9 166 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 PROKR1Q8TCW9 393 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 SETD7Q8WTS6 366 aaKnown RBP18.63■□□□□ 0.57
LMNB1-202ENST00000395354 OR4K3Q96R72 315 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 HBEGFQ99075 208 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 ACPTQ9BZG2 426 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 TCEAL2Q9H3H9 227 aaPredicted RBP18.63■□□□□ 0.57
LMNB1-202ENST00000395354 CAAP1Q9H8G2 361 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 SPAG4Q9NPE6 437 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 TM7SF3Q9NS93 570 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 TMED5Q9Y3A6 229 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 CABIN1Q9Y6J0 2220 aa18.63■□□□□ 0.57
LMNB1-202ENST00000395354 VPS13AQ96RL7 3174 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 RALGAPA1Q6GYQ0 2036 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 H0YIV9 168 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 ARHGAP33O14559 1287 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 EEDO75530 441 aaKnown RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 NPPAP01160 153 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 G6PDP11413 515 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 HSD3B1P14060 373 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 NME1P15531 152 aaKnown RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 ME2P23368 584 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 HSD3B2P26439 372 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 ARHGAP19Q14CB8 494 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 SPATS1Q496A3 300 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 VPS26BQ4G0F5 336 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 SGO1Q5FBB7 561 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 XKR6Q5GH73 641 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 C10orf62Q5T681 223 aaPredicted RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 SYTL1Q8IYJ3 562 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 MINDY1Q8N5J2 469 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 TFGQ92734 400 aaPredicted RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 WDR34Q96EX3 536 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 CMTM7Q96FZ5 175 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 METTL2AQ96IZ6 378 aaKnown RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 OR2M4Q96R27 311 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 TRNAU1APQ9NX07 287 aaKnown RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 MAP10Q9P2G4 905 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 STX18Q9P2W9 335 aaKnown RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 NKX1-2Q9UD57 310 aaPredicted RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 LEF1Q9UJU2 399 aaPredicted RBP18.62■□□□□ 0.57
LMNB1-202ENST00000395354 ASF1AQ9Y294 204 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 DMDP11532 3685 aa18.62■□□□□ 0.57
LMNB1-202ENST00000395354 CCDC154A6NI56 674 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 TRIM38O00635 465 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 ANKRD28O15084 1053 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 SEC22BO75396 215 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 SYPP08247 313 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 RPL38P63173 70 aaKnown RBP18.61■□□□□ 0.57
LMNB1-202ENST00000395354 HMGCS1Q01581 520 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 CEACAM7Q14002 265 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 DOC2AQ14183 400 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 HLA-BQ31612 363 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 RETREG3Q86VR2 466 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 LRRC56Q8IYG6 542 aaPredicted RBP18.61■□□□□ 0.57
LMNB1-202ENST00000395354 GLB1L3Q8NCI6 653 aaPredicted RBP18.61■□□□□ 0.57
LMNB1-202ENST00000395354 ELF4Q99607 663 aaPredicted RBP18.61■□□□□ 0.57
LMNB1-202ENST00000395354 GPATCH1Q9BRR8 931 aaKnown RBP18.61■□□□□ 0.57
LMNB1-202ENST00000395354 TMEM168Q9H0V1 697 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 EHD1Q9H4M9 534 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 PLEKHM1Q9Y4G2 1056 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 POLR3HQ9Y535 204 aaPredicted RBP18.61■□□□□ 0.57
LMNB1-202ENST00000395354 PCDHGA11Q9Y5H2 935 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 OTOGLQ3ZCN5 2332 aa18.61■□□□□ 0.57
LMNB1-202ENST00000395354 ZNF839A8K0R7 811 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 E7ENX8 843 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 E7EQ34 232 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 KRT36O76013 467 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 ERGP11308 486 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 PRPS2P11908 318 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 ACP5P13686 325 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 CTSEP14091 401 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 MAPK1P28482 360 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 GCKP35557 465 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 TBPL1P62380 186 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 TAP2Q03519 686 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 KIAA0040Q15053 153 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 RCN1Q15293 331 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 CAPRIN2Q6IMN6 1127 aaKnown RBP18.6■□□□□ 0.57
LMNB1-202ENST00000395354 OR5K2Q8NHB8 316 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 WDR20Q8TBZ3 569 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 TEX37Q96LM6 180 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 ZBTB18Q99592 522 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms