RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PRSS58Q8IYP2 241 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 C17orf53Q8N3J3 647 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 OR11G2Q8NGC1 345 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 GSDMBQ8TAX9 411 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 STT3BQ8TCJ2 826 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 GRK7Q8WTQ7 553 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 C8orf44Q96CB5 159 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 PRAP1Q96NZ9 151 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 MCMBPQ9BTE3 642 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 WDR54Q9H977 334 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 MRPS30Q9NP92 439 aaKnown RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 SLAMF7Q9NQ25 335 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 SMYD2Q9NRG4 433 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 INTS7Q9NVH2 962 aaKnown RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 GPR83Q9NYM4 423 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 ASIC3Q9UHC3 531 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 GPN3Q9UHW5 284 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-205ENST00000394892 CHMP2BQ9UQN3 213 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 PADI2Q9Y2J8 665 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 PCDHGB7Q9Y5F8 929 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 TEX264Q9Y6I9 313 aa8.43□□□□□ -1.06
ATG4A-205ENST00000394892 TNRC6AQ8NDV7 1962 aaKnown RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 A1L4Q6 167 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 OR2W5A6NFC9 320 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 DNAJB6O75190 326 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 SEMA7AO75326 666 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 JRKO75564 520 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 SEC31AO94979 1220 aaKnown RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 C1QAP02745 245 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 CELA2AP08217 269 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 ZGLP1P0C6A0 271 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 ENO3P13929 434 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 TCP1P17987 556 aaKnown RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 RPA3P35244 121 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 SLC26A3P40879 764 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 RPL21P46778 160 aaKnown RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 ITGA8P53708 1063 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 RRADP55042 308 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 GNG11P61952 73 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 CSNK1G2P78368 415 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 MAT1AQ00266 395 aaKnown RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 RELAQ04206 551 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 MRPL49Q13405 166 aaKnown RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 TSTA3Q13630 321 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 SPANXN3Q5MJ09 141 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 IGFL2Q6UWQ7 119 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 UBE2R2Q712K3 238 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 MAMDC2Q7Z304 686 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 CUZD1Q86UP6 607 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 PARP9Q8IXQ6 854 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 LMNTD2Q8IXW0 634 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 CSNK1A1LQ8N752 337 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 TTC29Q8NA56 475 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 MAGEC3Q8TD91 643 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 PSMF1Q92530 271 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 PNPLA2Q96AD5 504 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 CERS2Q96G23 380 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 IP6K3Q96PC2 410 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 OR4K3Q96R72 315 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 BARD1Q99728 777 aaKnown RBP8.42□□□□□ -1.06
ATG4A-205ENST00000394892 C17orf62Q9BQA9 187 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 FAM167BQ9BTA0 163 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 SGPP1Q9BX95 441 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 SPNS1Q9H2V7 528 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 ZNF304Q9HCX3 659 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 FAM114A2Q9NRY5 505 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 ABCF3Q9NUQ8 709 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 MRFAP1Q9Y605 127 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 TEX15Q9BXT5 2789 aa8.42□□□□□ -1.06
ATG4A-205ENST00000394892 NOTCH2Q04721 2471 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 A0A0A6YYC8 382 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 GOLGA6L10A0A0M3HER8 536 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 A0A1W2PQ72 361 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 TCP11X1B4DZS4 312 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 E7ESA3 106 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 I3L1I5 382 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 EIF3FO00303 357 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 PFDN6O15212 129 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 KLHL18O94889 574 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 WISP3O95389 354 aaPredicted RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 SYF2O95926 243 aaKnown RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 COX6A1P12074 109 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 NPPBP16860 134 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 FDXRP22570 491 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 HSD17B2P37059 387 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 BCL6P41182 706 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 EMP3P54852 163 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 TBPL1P62380 186 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 CBLBQ13191 982 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 NAE1Q13564 534 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 DSG2Q14126 1118 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 MORF4L2Q15014 288 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 TRADDQ15628 312 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 HIF1AQ16665 826 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 FAM214AQ32MH5 1076 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 TTLL9Q3SXZ7 439 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 HECTD2Q5U5R9 776 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms