RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CAMKK1Q8N5S9 505 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 KRTCAP2Q8N6L1 136 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 ZNF740Q8NDX6 193 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 GPR156Q8NFN8 814 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 OR2L8Q8NGY9 312 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 CDC26Q8NHZ8 85 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TSPEARQ8WU66 669 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 STMN2Q93045 179 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 UBE2E3Q969T4 207 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 CLDN23Q96B33 292 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 ROPN1LQ96C74 230 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 SPACA7Q96KW9 195 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 PRAP1Q96NZ9 151 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TSSK3Q96PN8 268 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 SLC39A3Q9BRY0 314 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 EBPLQ9BY08 206 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 SPNS1Q9H2V7 528 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TCEAL2Q9H3H9 227 aaPredicted RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 ACTL8Q9H568 366 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 BRF2Q9HAW0 419 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 SPATA6Q9NWH7 488 aaPredicted RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 CUEDC1Q9NWM3 386 aaPredicted RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 GID8Q9NWU2 228 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 NMRK1Q9NWW6 199 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 ASIC5Q9NY37 505 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 LEF1Q9UJU2 399 aaPredicted RBP8.33□□□□□ -1.08
TDP1-203ENST00000393454 ICKQ9UPZ9 632 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TMED5Q9Y3A6 229 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 PCDHGA7Q9Y5G6 932 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 DGKBQ9Y6T7 804 aa8.33□□□□□ -1.08
TDP1-203ENST00000393454 TDRD6O60522 2096 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 SPTY2D1-AS1A0A0U1RR47 76 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 A0A1W2PPV9 198 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 METTL12A8MUP2 240 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 H0Y3Z8 333 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 ANKRD28O15084 1053 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 AXIN1O15169 862 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 LRATO95237 230 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 ETHE1O95571 254 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 TGFB1P01137 390 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 F3P13726 295 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 JAK1P23458 1154 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 CXCR2P25025 360 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 CD27P26842 260 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 NDUFS1P28331 727 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 HNRNPH1P31943 449 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 MSX2P35548 267 aaPredicted RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 DPP6P42658 865 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 RPS9P46781 194 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 ZFP36L2P47974 494 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 MTTPP55157 894 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 EIF2B5Q13144 721 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 E2F2Q14209 437 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 CAPRIN1Q14444 709 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 PLCL1Q15111 1095 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 SF1Q15637 639 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 ICE2Q659A1 982 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 WASH2PQ6VEQ5 465 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 HACD2Q6Y1H2 254 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 PACS2Q86VP3 889 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 NRROSQ86YC3 692 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 TRIM48Q8IWZ4 208 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 LAS2Q8IYD9 372 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 FAM9CQ8IZT9 166 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 OR4E2Q8NGC2 313 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 LCN9Q8WX39 176 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 GFM2Q969S9 779 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 AIF1LQ9BQI0 150 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 GSDMCQ9BYG8 508 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 ZMYND15Q9H091 742 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 KIR3DX1Q9H7L2 352 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 PELI2Q9HAT8 420 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 WASH6PQ9NQA3 447 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 TMEM45AQ9NWC5 275 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 ZNF624Q9P2J8 865 aaPredicted RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 RUVBL1Q9Y265 456 aaKnown RBP8.32□□□□□ -1.08
TDP1-203ENST00000393454 PCDHB11Q9Y5F2 797 aa8.32□□□□□ -1.08
TDP1-203ENST00000393454 LRP4O75096 1905 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 FEZF1A0PJY2 475 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 DYTNA2CJ06 578 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 ANKDD1BA6NHY2 528 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 ISM1B1AKI9 464 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SAP18O00422 153 aaKnown RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 AKAP10O43572 662 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 EEDO75530 441 aaKnown RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 TCN1P20061 433 aaPredicted RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 ME2P23368 584 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 TACR1P25103 407 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 CD38P28907 300 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SLC19A1P41440 591 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 PLIN5Q00G26 463 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 C1orf61Q13536 156 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 TLR1Q15399 786 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 FAM174BQ3ZCQ3 159 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 PRRT3Q5FWE3 981 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 PIGGQ5H8A4 983 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 COQ5Q5HYK3 327 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 PAGE3Q5JUK9 113 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 C10orf62Q5T681 223 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms