RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 GLYATL1P3A0A0U1RQE8 302 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 FAM95CA0A1B0GW59 222 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 UBE2QL1A1L167 161 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SMIM30A4D0T7 59 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ARGFXA6NJG6 315 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SIGLEC6O43699 453 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 LCMT2O60294 686 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 NDUFS6O75380 124 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SERPINA3P01011 423 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 HOXD4P09016 255 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 LINC00032P0C843 101 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 PEPDP12955 493 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 JUNDP17535 347 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 TPSB2P20231 275 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 HMGCLP35914 325 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CLCN3P51790 818 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 VSX2P58304 361 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 MTPNP58546 118 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SNRPFP62306 86 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CDH17Q12864 832 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 VEPH1Q14D04 833 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 TPSAB1Q15661 275 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 TUSC1Q2TAM9 212 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF667Q5HYK9 610 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 MACC1Q6ZN28 852 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 VSIG10LQ86VR7 867 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 DPP10Q8N608 796 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 MOSPD2Q8NHP6 518 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 C9orf43Q8TAL5 461 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 HTR3CQ8WXA8 447 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ING5Q8WYH8 240 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 FKBP10Q96AY3 582 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CDCA5Q96FF9 252 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ELMOD3Q96FG2 381 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 RNF157Q96PX1 679 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 HSD17B14Q9BPX1 270 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 BTBD1Q9H0C5 482 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ARL6Q9H0F7 186 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SDCBP2Q9H190 292 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CACYBPQ9HB71 228 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 TOGARAM1Q9Y4F4 1720 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 LOC102723532A0A0G2JNH3 316 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SUPT3HB4E1H0 165 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 M0R2N6 131 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 RNGTTO60942 597 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CRTAPO75718 401 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 IPO13O94829 963 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SUPT20HL2P0C7V6 817 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TPH1P17752 444 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CLCN4P51793 760 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TNFRSF17Q02223 184 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 HNRNPA0Q13151 305 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SEC23BQ15437 767 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FCN2Q15485 313 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF699Q32M78 642 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF792Q3KQV3 632 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 RNF212Q495C1 297 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 Q5BKY6 102 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 RNASE12Q5GAN4 147 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 VN1R5Q7Z5H4 357 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 DENND1CQ8IV53 801 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 C4orf19Q8IY42 314 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 HS3ST5Q8IZT8 346 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MINDY1Q8N5J2 469 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MFSD3Q96ES6 412 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ITCHQ96J02 903 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 NKX6-2Q9C056 277 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TREM1Q9NP99 234 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CMTM6Q9NX76 183 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 GFOD1Q9NXC2 390 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SPASTQ9UBP0 616 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ACAD8Q9UKU7 415 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 GLI3P10071 1580 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 A0A1B0GVI7 797 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 C3orf70A6NLC5 250 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 GPR25O00155 361 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 NARSO43776 548 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 HCN1O60741 890 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MICAL2O94851 1124 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SLC6A4P31645 630 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TGM4P49221 684 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 RAB10P61026 200 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FOXM1Q08050 763 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PWP1Q13610 501 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MFSD10Q14728 455 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 LAPTM4AQ15012 233 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 C9orf152Q5JTZ5 239 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ALKAL2Q6UX46 152 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CATSPERGQ6ZRH7 1159 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 C1orf186Q6ZWK4 172 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 RHOUQ7L0Q8 258 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FGD2Q7Z6J4 655 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 GPR65Q8IYL9 337 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 OR52K1Q8NGK4 314 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SPPL2BQ8TCT7 592 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 RNF34Q969K3 372 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SIGLEC10Q96LC7 697 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ZFP42Q96MM3 310 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MGLLQ99685 303 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 C7orf50Q9BRJ6 194 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms