RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ARRDC3Q96B67 414 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 GPR21Q99679 349 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 WDR70Q9NW82 654 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 THAP10Q9P2Z0 257 aaPredicted RBP18.42■□□□□ 0.54
CCDC50-202ENST00000392456 MBD1Q9UIS9 605 aaPredicted RBP18.42■□□□□ 0.54
CCDC50-202ENST00000392456 TMPRSS11EQ9UL52 423 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 MN1Q10571 1320 aaPredicted RBP18.42■□□□□ 0.54
CCDC50-202ENST00000392456 TSPAN11A1L157 253 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 ANHXE9PGG2 379 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 SOCS2O14508 198 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 RHOBTB1O94844 696 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 EPHX1P07099 455 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 KCNA5P22460 613 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 CBLP22681 906 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 ME2P23368 584 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 CCR10P46092 362 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 SLC1A6P48664 564 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 SPINT3P49223 89 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 NUDT2P50583 147 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 SNX20Q7Z614 316 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 POC5Q8NA72 575 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 TSPAN17Q96FV3 270 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 ST6GAL2Q96JF0 529 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 UHRF1Q96T88 793 aaPredicted RBP18.42■□□□□ 0.54
CCDC50-202ENST00000392456 WACQ9BTA9 647 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 P2RY12Q9H244 342 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 EIF3KQ9UBQ5 218 aaKnown RBP18.42■□□□□ 0.54
CCDC50-202ENST00000392456 CD207Q9UJ71 328 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 IKZF3Q9UKT9 509 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 EDDM13A0A1B0GTR0 161 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 TRPC5OSA6NMA1 111 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 ZBTB14O43829 449 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 DLX3O60479 287 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 NOS1APO75052 506 aaPredicted RBP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 UGT2B11O75310 529 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 CDK14O94921 469 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 PTTG1O95997 202 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 RALBP11234 206 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 PKMP14618 531 aaKnown RBP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 ZNF37AP17032 561 aaPredicted RBP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 UQCRC1P31930 480 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 CSTF2P33240 577 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 SUOXP51687 545 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 PKNOX1P55347 436 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 KLF10Q13118 480 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 HMBOX1Q6NT76 420 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 CHST15Q7LFX5 561 aaPredicted RBP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 CCDC103Q8IW40 242 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 DSELQ8IZU8 1212 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 CBARPQ8N350 705 aaPredicted RBP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 CCNYL1Q8N7R7 359 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 SIDT2Q8NBJ9 832 aaKnown RBP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 SNAPC3Q92966 411 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 PTERQ96BW5 349 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 ADI1Q9BV57 179 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 LHPPQ9H008 270 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 DNAH14Q0VDD8 3507 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 TRBV5-4A0A0C4DH59 114 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 C2CD4DB7Z1M9 353 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 LTA4HP09960 611 aaKnown RBP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 DDOSTP39656 456 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 ST13P50502 369 aaKnown RBP18.41■□□□□ 0.54
CCDC50-202ENST00000392456 ARHGDIAP52565 204 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 SEC13P55735 322 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 SLC16A12Q6ZSM3 486 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 ISCA2Q86U28 154 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 PJA1Q8NG27 643 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 ALG9Q9H6U8 611 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 PRSS16Q9NQE7 514 aa18.41■□□□□ 0.54
CCDC50-202ENST00000392456 K7EQS6 105 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 AIM2O14862 343 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 CKMT2P17540 419 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 NCF2P19878 526 aaPredicted RBP18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ALAS2P22557 587 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 PTGER3P43115 390 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 HIST2H2ACQ16777 129 aaPredicted RBP18.4■□□□□ 0.54
CCDC50-202ENST00000392456 FAM83EQ2M2I3 478 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 SLC36A3Q495N2 470 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ZNF773Q6PK81 442 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ABRAXAS1Q6UWZ7 409 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 DBX2Q6ZNG2 339 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 CHSY3Q70JA7 882 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 OR2T34Q8NGX1 318 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 LKAAEAR1Q8TD35 194 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 NRBF2Q96F24 287 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 LRIG1Q96JA1 1093 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 YTHDF1Q9BYJ9 559 aaKnown RBP18.4■□□□□ 0.54
CCDC50-202ENST00000392456 NTN4Q9HB63 628 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ABCB10Q9NRK6 738 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 OXSMQ9NWU1 459 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ENOPH1Q9UHY7 261 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 TICRRQ7Z2Z1 1910 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 DCXO43602 365 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ITGB6P18564 788 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ITGALP20701 1170 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 ACRV1P26436 265 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 VIPR1P32241 457 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 SERPINB5P36952 375 aa18.4■□□□□ 0.54
CCDC50-202ENST00000392456 HTR3AP46098 478 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms