RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TMED3Q9Y3Q3 217 aa1.05□□□□□ -2.24
SNORD28B-201ENST00000390993 NPHP3Q7Z494 1330 aa1.05□□□□□ -2.24
SNORD28B-201ENST00000390993 RUSC2Q8N2Y8 1516 aa1.05□□□□□ -2.24
SNORD28B-201ENST00000390993 GPR75-ASB3A0A0A6YYF3 556 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 OR2A25A4D2G3 310 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 SNURFLB1AK76 121 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 RTL8CO15255 209 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 CYTIPO60759 359 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 USO1O60763 962 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 DDHD2O94830 711 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 ACSL3O95573 720 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 IGHV2-70P01814 119 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 ATP1B1P05026 303 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 KRTAP1-4P0C5Y4 121 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 LINGO3P0C6S8 592 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PCP11498 1178 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 GP1BBP13224 206 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 FOLR2P14207 255 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 GPR183P32249 361 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PCGF2P35227 344 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 SFTPDP35247 375 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 SOX3P41225 446 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 ASCL1P50553 236 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 NDST2P52849 883 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 MAPK12P53778 367 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 MAT1AQ00266 395 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 FKBP3Q00688 224 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 CD300CQ08708 224 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 ZNF415Q09FC8 603 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 EPS8Q12929 822 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 RUNX3Q13761 415 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 VEZF1Q14119 521 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 GCKRQ14397 625 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 CAPRIN1Q14444 709 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 WTAPQ15007 396 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 CBWD6Q4V339 395 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 CBWD3Q5JTY5 395 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 SPDYCQ5MJ68 293 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 MARC1Q5VT66 337 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 AGAP7PQ5VUJ5 663 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 GARNL3Q5VVW2 1013 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 KRT39Q6A163 491 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PRR27Q6MZM9 219 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PRSS55Q6UWB4 352 aaPredicted RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 MAATS1Q7Z4T9 603 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 TMPRSS11BQ86T26 416 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 KBTBD6Q86V97 674 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 MMD2Q8IY49 270 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 EXOC8Q8IYI6 725 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 SLC34A3Q8N130 599 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 GPC2Q8N158 579 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PARP8Q8N3A8 854 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 CARNMT1Q8N4J0 409 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 TCEANCQ8N8B7 351 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 AVL9Q8NBF6 648 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 OR4C15Q8NGM1 316 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 OR10S1Q8NGN2 331 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 SPPL2AQ8TCT8 520 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PTPMT1Q8WUK0 201 aaPredicted RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PRPF31Q8WWY3 499 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PTERQ96BW5 349 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 CNRIP1Q96F85 164 aaPredicted RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PGM2Q96G03 612 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 RSRC1Q96IZ7 334 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 MPP4Q96JB8 637 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 C1orf147Q96MC9 270 aaPredicted RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 LINC00167Q96N53 147 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 ZIM3Q96PE6 472 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 CDCA3Q99618 268 aaPredicted RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 HNRNPABQ99729 332 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 OCR1Q9BZK8 76 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 LRRCC1Q9C099 1032 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 STRADBQ9C0K7 418 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 SHARPINQ9H0F6 387 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PPIL3Q9H2H8 161 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 ADNPQ9H2P0 1102 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 TLE6Q9H808 572 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 GNB4Q9HAV0 340 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 GSN-AS1Q9NRJ2 163 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 TNFRSF19Q9NS68 423 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 HAUS2Q9NVX0 235 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 MRPL15Q9P015 296 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 HACD3Q9P035 362 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 IL36AQ9UHA7 158 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 SLC12A6Q9UHW9 1150 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 POMT2Q9UKY4 750 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 PTRH2Q9Y3E5 179 aaKnown RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 KLF2Q9Y5W3 355 aaPredicted RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 STYXL1Q9Y6J8 313 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 IL16Q14005 1332 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 ARID4BQ4LE39 1312 aaPredicted RBP1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 NOTCH2Q04721 2471 aa1.04□□□□□ -2.24
SNORD28B-201ENST00000390993 LOC102723996A0A087X1L8 192 aa1.03□□□□□ -2.24
SNORD28B-201ENST00000390993 TRBV4-1A0A0J9YWV2 114 aa1.03□□□□□ -2.24
SNORD28B-201ENST00000390993 hCG_38984A0A1B0GV85 526 aa1.03□□□□□ -2.24
SNORD28B-201ENST00000390993 A0A1W2PQ09 198 aa1.03□□□□□ -2.24
SNORD28B-201ENST00000390993 A6NCN8 305 aa1.03□□□□□ -2.24
SNORD28B-201ENST00000390993 TMEM221A6NGB7 291 aa1.03□□□□□ -2.24
SNORD28B-201ENST00000390993 NKX6-3A6NJ46 265 aa1.03□□□□□ -2.24
SNORD28B-201ENST00000390993 H0Y9J4 135 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms